KEGG   Methyloceanibacter caenitepidi: GL4_0863
Entry
GL4_0863          CDS       T03636                                 
Name
(GenBank) Lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
mcg  Methyloceanibacter caenitepidi
Pathway
mcg00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:mcg00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    GL4_0863
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:mcg01007]
    GL4_0863
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mcg03016]
    GL4_0863
Enzymes [BR:mcg01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     GL4_0863
Amino acid related enzymes [BR:mcg01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   GL4_0863
Transfer RNA biogenesis [BR:mcg03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    GL4_0863
SSDB
Motif
Pfam: tRNA-synt_1f Anticodon_2 tRNA-synt_1b tRNA-synt_1g tRNA-synt_1e DUF4131
Other DBs
NCBI-ProteinID: BAQ16324
UniProt: A0A0A8K2W5
Position
892081..893736
AA seq 551 aa
MSETTSAGRDAAPIEINSELLAHAHVSKAWPFEEARKVVSRLKRIPQPTGSIIFETGYGP
SGLPHIGTFGEVARTTMVRHAFRILTEDKIPTRLICFSDDMDGLRKVPDNIPNKEMVAAH
LEKPLTQVPDPFNQYPSFGQHNNARLRTFLDTFGFSYEFLSATQCYTSGRFDATLLRVLE
HYEEIRDVILPTLGPERRATYSPFLPISPATGKVLQVPIIDRDLAAGSILYKDPDTGKLT
QVSVTGGHCKLQWKADWAMRWAALGVDYEMAGKDLIDSVRLSGRICRILGRQQPEGFNYE
LFLDENGEKISKSRGNGLTIEEWLSYASPESLALYMYQSPKKAKRLYFDVIPRAVDEYAG
HLAAFPKEDQAAKLTNPVWHIHEGSPPEADLPISFALLLNLASASNSEDRSVLWGFIQRY
APEATPETEPLLDELVGYAIRYFHDFVKPSKQYRAPTDQERAAFADLDQRLVALPDDVMA
EEIQNEVYAVGKEHGFEPLRDWFQALYQVLLGQSQGPRFGSFVQLYGIDNTRSLIARALA
GELLGANVSNN
NT seq 1656 nt   +upstreamnt  +downstreamnt
atgtccgagaccacgagcgctggccgcgacgcggccccaatcgagatcaattccgaactc
ctcgcccacgcccatgtgagcaaggcctggccgttcgaggaggcgcgcaaggtcgtgagc
cggctgaagcggatccctcagccgaccggttcgatcattttcgaaacgggctacgggccc
tcggggctgccgcatatcggaacgttcggcgaggtcgcgcgcaccaccatggtgcgccac
gccttccggatcctgaccgaggacaagatcccgacgcggctgatctgtttttccgacgac
atggatggcttgcggaaagttccggacaatatcccgaacaaggagatggtcgccgcgcat
ctggaaaagccgctgacccaagtgccggacccgttcaaccagtatcccagtttcggccag
cacaacaatgcgcgcctgcggacctttctggatacgttcggcttctcatacgagttcctg
tcggcgactcagtgctacacgtcgggccggtttgacgcgaccttgctcagggtgctcgag
cactacgaggagatccgggacgtgatcctgccgacgctggggccggagcggcgcgccacc
tatagtccgttcctcccgatctcgccggcgacgggcaaggtgttgcaggtgccgatcatc
gatcgcgacctcgccgccggctcaattctctataaggaccccgatacggggaagctgacg
caggtgtccgtgacgggcggccactgcaagctgcaatggaaggcggactgggccatgcgc
tgggctgcgctaggcgtcgactacgagatggcgggcaaggacctgatcgactcggtgcgt
ctgtcgggccgcatttgccgtatcctcggccgccagcagcccgaaggcttcaactacgaa
ctcttcctcgacgagaacggggagaagatctcgaagtcccgcggcaacggtctgaccatc
gaggaatggctgtcctacgcctcgcccgagagtctcgcgctgtacatgtatcagagccca
aagaaggcgaagcggctctacttcgatgtcatcccgcgcgccgtcgacgaatatgccggg
cacctcgcggccttcccgaaggaggaccaggcggcgaagctgaccaatcccgtctggcac
attcacgagggatcgccgcccgaggccgatctgccgatcagctttgcccttctgctcaat
ctcgcctcggcctcgaactccgaggaccgctcggtgctatggggcttcatccagcgctac
gcgccggaagcgacccccgagaccgagcccttgctggacgaactcgtgggctacgcgatc
cgttatttccacgacttcgtgaagccgtcgaagcagtaccgcgcgccgacggatcaagag
cgcgcggcgttcgccgatctcgaccagcggctcgtcgcgctgccggacgacgtgatggct
gaggagattcagaacgaggtttatgcggtgggcaaggagcacgggttcgagccgttgcgg
gactggtttcaggcgctctatcaggtgctgctgggccagtcgcaaggcccgcgcttcgga
tcctttgtgcagctatacgggatcgacaacacacgctccctgatcgcacgggcccttgcg
ggcgagcttcttggcgcaaatgtttcaaataattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (113)   
   KEGG ORTHOLOGY (1)   
   RefGene (110)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (134)   

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