KEGG   Methylorubrum extorquens CM4: Mchl_3946
Entry
Mchl_3946         CDS       T00809                                 
Name
(GenBank) AMP-dependent synthetase and ligase
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
mch  Methylorubrum extorquens CM4
Pathway
mch00061  Fatty acid biosynthesis
mch00071  Fatty acid degradation
mch01100  Metabolic pathways
mch01212  Fatty acid metabolism
mch02024  Quorum sensing
Module
mch_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:mch00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Mchl_3946
   00071 Fatty acid degradation
    Mchl_3946
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Mchl_3946
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:mch01004]
    Mchl_3946
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mch04147]
    Mchl_3946
Enzymes [BR:mch01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Mchl_3946
Lipid biosynthesis proteins [BR:mch01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Mchl_3946
Exosome [BR:mch04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Mchl_3946
  Exosomal proteins of breast cancer cells
   Mchl_3946
SSDB
Motif
Pfam: AMP-binding AMP-binding_C bpX2
Other DBs
NCBI-ProteinID: ACK84757
UniProt: B7KYK6
Position
4142926..4144662
AA seq 578 aa
MAQDRSAERPWLAAYPPGIPADIDVDSVGTVVDLFDRSVLRFAERPAITCFGASLRYREV
GAAAQAVAAWLAANGYGKAGKGSETGVDGIGDRIAVMMPNVPACPVSLLGVLVAGCTVVN
VNPLYTPRELAAQINDSGARVLFVLENFCHTVAQALPQMPSLERIVVAGPGDLLGLKGRI
VDLVSRRVKRAVPPYTLPAGRTLRFEAVVRAGRGLKRPSVAIEPGDVAFLQYTGGTTGIA
KAAMLTHRNIMANVEQSRAWFRGPAGEGDGHVAVTALPLYHIFALTACFLFFFRLGGCCL
LIPNPRDLDGFVKTLSRTRFTNFAGVNTLFNALNNHPKISTVDFSNVEYVVGGGMAVQSA
VAARWKAITGQTILEGYGLSETSPVVSVNPLGLADWTGTIGYPLPSTEVTIRAEDGTVLP
FGVPGELCVRGPQVMAGYWNRPEETRAAMTADGFFRTGDVAVMTPDGQIRIVDRMKDMIL
VSGFNVYPNEVEDVLATHPAVVECAVVGAPCGESGEMVVAHVVLRDPSVEPDALRAHARA
SLTGYKVPRRIVIQDSLPKTNVGKVLRRALRDSGPAAG
NT seq 1737 nt   +upstreamnt  +downstreamnt
atggcgcaggaccggagcgcggagcgtccttggctggccgcctatccccccggcattccc
gccgatatcgacgtcgattccgtcggcacggtggtcgatctgttcgaccgcagcgtgctg
cgcttcgccgagcgcccggcgatcacctgcttcggcgcgagcctgcgctaccgcgaggtc
ggcgccgcggcgcaggcggtggcggcgtggctcgccgccaacggctacggcaaggccggc
aagggcagcgagacgggtgtggacggcatcggcgaccgcatcgcggtgatgatgcccaac
gtcccggcctgtcccgtctcgctgctcggcgtgctggtggcgggctgcaccgtcgtcaac
gtcaacccgctctacaccccgcgcgaactcgccgcgcagatcaacgattccggtgcccgt
gtcctcttcgtgctggagaacttctgccacacggtcgcgcaggcgctgccgcagatgccg
agcctggagcggatcgtcgtggcgggccccggcgacctgctcgggctgaagggacggatc
gtcgatctcgtctcgcggcgggtgaagcgggcggtgccgccctacaccctgccggccggg
cggaccctgcggttcgaggcggtggtgcgggcgggccgcggcctcaagcgcccctcggtc
gcgatcgagcccggcgacgtcgccttcctgcaatataccggcggcaccaccggcatcgcc
aaggcggcgatgctgacccaccgcaacatcatggccaatgtcgagcagagccgggcgtgg
ttccgcggtccggcgggggagggggacggacacgtggcggtgacggcgctgccgctctac
cacatcttcgcgctgacggcctgcttcctgttcttcttccggctcggcggttgctgcctg
ctgatcccgaacccgcgcgatctcgacggcttcgtgaagacgctcagccgcacccgcttc
accaacttcgccggggtgaacacgctgttcaacgcgctgaacaaccacccgaagatcagc
acggtcgatttctcgaacgtggagtacgtggtcggcggcggcatggcggtgcagtcggcg
gtcgccgcccgctggaaggcgatcaccggccagaccatcctcgaaggctacggcctgtcg
gagacctcgccggtggtgagcgtcaaccccctcgggctcgccgactggaccgggacgatc
ggctatcccttgccctcaaccgaggtgacgatccgcgccgaggatggcacggtactgccc
ttcggcgtgcccggcgaactctgcgtgcgcggcccccaggtgatggccggctactggaac
cgcccggaggagacgcgggcggcgatgaccgccgacggcttcttccgcaccggcgacgtg
gcggtgatgacgccggacgggcagatccgcatcgtcgaccggatgaaggacatgatcctc
gtctccggcttcaacgtctacccgaacgaggtcgaggacgtgctcgccacccatccggcg
gtggtcgaatgcgccgtggtcggcgcaccctgcggcgagagcggcgagatggtcgtcgcc
cacgtggtcctgcgcgatccgtccgtggagccggacgcgctcagggcgcatgcccgcgcg
agcctcaccggctacaaggtgccccgccggatcgtgatccaggacagcctgccgaagacc
aatgtcggcaaggtgctgcgccgggccctgcgggacagcgggccggcggcgggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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