KEGG   Momordica charantia (bitter melon): 111006078
Entry
111006078         CDS       T05045                                 
Name
(RefSeq) ABC transporter B family member 20 isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
mcha  Momordica charantia (bitter melon)
Pathway
mcha02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:mcha00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    111006078
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:mcha02000]
    111006078
   04147 Exosome [BR:mcha04147]
    111006078
   04090 CD molecules [BR:mcha04090]
    111006078
Enzymes [BR:mcha01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     111006078
Transporters [BR:mcha02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    111006078
Exosome [BR:mcha04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111006078
CD molecules [BR:mcha04090]
 Proteins
  111006078
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_21 AAA_15 Zeta_toxin AAA_22 AAA_16 RsgA_GTPase DUF2839 AAA_30 DUF87 Glyoxalase_3
Other DBs
NCBI-GeneID: 111006078
NCBI-ProteinID: XP_022133515
UniProt: A0A6J1BVG5
Position
Unknown
AA seq 1399 aa
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGSDPTGDRLEEPEEIEEPEDIEP
PPAAVPFSRLFACADRLDWTLMVVGSIAAAAHGTALVVYLHYFAKIVHVLRIPPEEQSQR
FRELALRVVYIAIGVFVAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNG
DIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAG
GISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYATSLQATLRYGI
LISLVQGLGLGFTYGLAICSCALQLWVGRFLVTHQKAHGGEIITALFAVILSGLGLNQAA
TNFYSFDQGRIAAYRLFEMISRSSSASNQDGVTPSSIQGNIEFRNVYFSYLSRPEIPILS
GFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNVKLEWLRSQIG
LVTQEPALLSLSIRDNIAYGRNATLDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGIELM
EEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAEKAVQAALDLLMLGRSTIIIARRLSLI
RNADYIAVMEEGQLVEMGTHDELLSLDGLYTELLKCEEAAKLPRRMPVRNYKESSTFQIE
KDSSASHSVQEPSSPKMTKSPSLQRVPGVFRPTDGVYNNSLESPKVPSPPPEKMLENGQI
FDSSVDKEPSIRRQDSFEMRLPELPKIDVQSAHRQMSNGSDPESPISPLLTSDPKSERSH
SQTFSRLHSQSDDFRMKAKEAKDTKLKKSPAFWRLAELSFAEWLYAVLGSLGAAIFGSFN
PLLAYVIALIITAYYRRDEGHNIRHEVDRWCLIIACMGFVTVIANFLQHFYFGIMGEKMT
ERVRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRATFSNRLSIFIQDSAAVIV
ALLIGMLLQWRLALVALATLPVLTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIY
TVVAFCAGNKVMELYRLQLNKIFKESFLHGMAIGFAFGFSQFLLFACNALLLWYTPLSVQ
NHTKDLPTALKVYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNSA
LKPPNVYGSIELKNVDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIER
FYDPVAGQVLLDGRDLKNYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKE
AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIE
SESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGL
YVRLMQPHFGKGLRQHRLV
NT seq 4200 nt   +upstreamnt  +downstreamnt
atgatgatctctcggggcttgtttgggtggtctccacctcatatacaacccttgactcct
gtctccgaggtatcggagccgccggaatctccgtcgccctaccttgacccgggtagtgac
cctaccggcgaccgacttgaggagcctgaagagatcgaggaacccgaggatattgagccg
cccccggctgctgtgccattttcgcggctttttgcgtgtgccgaccggcttgattggact
ctcatggttgttggatcgattgccgctgcagcgcacggtactgctttggttgtttacctc
cattacttcgctaagattgtccatgtgctgaggattcctccggaagagcagtctcagaga
tttagggagcttgctttaagagttgtttatatcgctattggtgttttcgttgctggttgg
attgaggtttcatgctggattctgaccggtgaaaggcagactgctgtcattagatccaga
tatgttcaagtgttacttaatcaggatatgagttttttcgatacatatggcaacaatggg
gatattgttagccaagtactcagtgatgtgctactcattcagtctgctcttagtgaaaaa
gttggaaactatatacacaatatggctacattcttcagtggccttgtcattggatttatt
aactgctggcagattgctctcataactttagccactggtcccttcatagttgctgctgga
ggaatatcaaatatatttcttcacaggcttgctgaaaatattcaagatgcatatgctgaa
gctgctagcatcgcagagcaggcagtctcttatgtcaggacgttgtatgcattcacaaat
gaaacattagccaagtattcttatgcaacgtcattacaagcaactcttagatacggtata
ttgataagccttgtgcaaggtcttgggctcggattcacttatggacttgcaatatgttcc
tgtgctttgcaactttgggttggaaggttcttggtcacacatcagaaagctcatggagga
gagattataacggcactatttgctgtaattttaagtggccttgggttaaaccaagcggct
acaaacttttattcatttgaccaagggcgcatagctgcttatagactttttgagatgata
agtcggtcatcatctgcaagtaatcaggatggagtcactccatcttccattcaaggaaat
attgaatttcgtaatgtatatttcagctatctatctcgccctgaaattcctatcttgagt
gggttttaccttactgtgcctgcaaagaaagctgtggcacttgttgggagaaatggatct
ggaaaaagcagtataatcccactcatggagcggttttacgatcccacattaggagaagtt
cttttggatggagaaaatattaaaaacgtgaaattggagtggctaagaagtcagatagga
ttagtaacacaagaacctgcgttgctaagtttgagtatacgagataatattgcatacggg
cgaaatgctactctggatcaaattgaggaagctgctaaaatagctcatgcacatacgttt
attagttctcttgagaaaggatacgacacacaggtaggcagggctggaattgagctgatg
gaggagcagaaaataaaactctcaattgctagagccgtgcttttaaatccatctattctg
ctgcttgatgaggtcactggtggtcttgattttgaggctgaaaaagccgtgcaagcggct
cttgatcttctcatgctgggacgttcaacaataataatagctcggcggcttagtctaata
cggaatgcggactacattgccgtgatggaggagggccaacttgttgaaatgggtacgcat
gatgaattgttgagccttgatggcctttacacagaacttctcaaatgtgaagaagctgca
aagctccccagaaggatgccagtcagaaactacaaggagtcttcaactttccagattgaa
aaggattcttctgcaagtcacagtgttcaagaaccatcatcccctaaaatgacaaaatca
ccatcccttcagagagttcctggtgttttccgaccaacagatggcgtttataacaactct
cttgaatcacctaaagttccaagcccccctcctgaaaagatgttggaaaatggtcagatc
tttgattcttcagttgacaaggaaccatcaattaggcggcaggatagttttgaaatgaga
ctcccagagttgccaaaaattgacgttcagtctgcacatcgtcaaatgtcaaatggctca
gaccctgagtcgcctatttcgcctctcttgacatctgatcccaaaagtgaacgttcccat
tcacagacgttcagtagactgcacagccaatctgatgacttccgaatgaaagcaaaggaa
gctaaggatactaagcttaaaaagtcaccagccttttggaggcttgcagagcttagtttt
gcagagtggctgtatgccgtcttaggaagccttggtgcggccatctttggatctttcaat
cctcttctcgcatatgtaattgctctgataataacagcatattacagaagggatgaaggt
cataacatacggcatgaggtagacagatggtgcttgatcattgcttgcatgggctttgtc
acagtgattgccaattttctgcaacatttttactttggaataatgggggagaaaatgact
gagcgagttaggagaatgatgttttcagctatgctacgaaatgaagttggatggtttgac
gaagaggaaaatagcgcagacactctatccatgcgtttggcaaacgatgctacattcgta
agagctacttttagcaaccgactttctatatttattcaagatagtgctgctgtcattgtg
gcacttcttattgggatgttgctacaatggcgcttggcacttgtggcattggcaacgttg
ccagtgctaactgtttctgccattgcacagaagttatggcttgctggattctcaaggggc
atccaggagatgcaccggaaggcatctttggttcttgaagatgcagttagaaacatatac
accgtggtagcattctgtgctggaaacaaggttatggaactctacagactgcaactgaat
aaaatttttaaggagagtttccttcacgggatggctattggttttgcattcggcttttca
cagtttctgctttttgcctgtaatgcccttcttctctggtacactccactttctgtccaa
aatcatactaaggatctgcccactgctcttaaagtgtatatggtgttctcttttgcaacg
tttgccttggtggaaccttttgggttggctccatatatacttaaacggcgcaaatcactc
atttcagtatttgaaatcatagatcgtgtaccgaagattgacccagatgataactctgca
ctgaagccacccaatgtttatggaagcattgagctgaaaaatgtagatttctgttatcct
actcgtcctgaggttttggtattgagcaatttcagtctaaaggtcaatggggggcagacg
gtggctgtggtgggtgtttctgggtcgggaaagagcacgataatatcgttgatcgagaga
ttctatgatcctgttgctggtcaggttttgttggacggtcgagatttgaaaaactataac
ttgagatggttgcggaatcatttaggtcttgttcagcaggaacctataatcttttcaaca
accattagggaaaacattatatatgcaaggcataatgccagtgaagctgaaatgaaagag
gctgctagaatagcaaacgctcaccatttcattagtagcctgcctcatggttatgacaca
catgtaggcatgaggggtgtggatctaaccccggggcagaaacagagaatcgcaatcgct
cgggtagtattgaagaatgcacctatcctattgttggacgaggcaagttcctcaatcgaa
tccgagtcaagtcgggtcgtgcaagaggctctcgacactttaatcatgggaaacaaaaca
accattctgattgcccatagagccgcaatgatgaggcacgttgacaatattgtggtacta
aatggtgggcgaatagtggaggagggtactcacgattccttggtggccaagaatggccta
tatgtgcgcttgatgcagccacatttcggtaagggtttgcgacagcatcgacttgtttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system