KEGG   Moraxella catarrhalis 25240: DR90_1000
Entry
DR90_1000         CDS       T03217                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K14159  ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
Organism
mcs  Moraxella catarrhalis 25240
Pathway
mcs03030  DNA replication
mcs03430  Mismatch repair
mcs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mcs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DR90_1000 (dnaQ)
   03430 Mismatch repair
    DR90_1000 (dnaQ)
   03440 Homologous recombination
    DR90_1000 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcs03032]
    DR90_1000 (dnaQ)
   03400 DNA repair and recombination proteins [BR:mcs03400]
    DR90_1000 (dnaQ)
Enzymes [BR:mcs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DR90_1000 (dnaQ)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     DR90_1000 (dnaQ)
DNA replication proteins [BR:mcs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DR90_1000 (dnaQ)
    RNase H
     DR90_1000 (dnaQ)
DNA repair and recombination proteins [BR:mcs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DR90_1000 (dnaQ)
SSDB
Motif
Pfam: RNase_H RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AIK00168
UniProt: A0A3A9QE04
Position
1073239..1074537
AA seq 432 aa
MSQLNIAYTDGACKGNGKQGVSAGGWGVYLHYFNGDERHLWGGEPDTTNNRMELMAAITA
LEATPAQIPLQLWTDSGYVKDGITQWIGGWKLRGWKKADGKPVLNQDLWQRLDQLTQNRI
IDWQWIKGHAGHAGNEMADQLANKGVDGFGDETLPNPIVHNDENFMINTPKPKHPYAYNT
IQNPDYDGDTSRTNTDFWPILPKPDNRDAPERQLIMDTETTGFNEAGGDRIVEVGIVELV
GRKFTGNILHVYINPEKHMDDAVIQVHGISNAFVADKPKFAEVAQQIYEFMAGSEVIAHN
AAFDMKFLNMEFNRAGLSNFANSVKVTDTLALAKQMYPGQKNSLDALVKRLGVGQKDRTF
HGALLDSEILAEVYLAMTGGQIAMAIDDDNTGGSNTRSTGSAFYDLSQYADSLALSESDI
EADALWRAKVLS
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgagccaacttaatatcgcttataccgacggcgcctgtaaaggcaatggaaaacaaggc
gtatctgcaggcggttggggcgtgtatttgcattatttcaatggcgatgagcggcatctg
tggggcggtgagcctgatacgaccaataatcgcatggaattgatggctgccatcacagct
ttggaggcaacgcctgcacagattcctctgcaactttggacagattcaggctatgttaaa
gatggcataactcagtggattggcggttggaagttgcgtggttggaaaaaagcagatggc
aagcctgtcttaaatcaagacctatggcaacgattggatcagctgacccaaaatcgcatc
attgattggcaatggatcaaaggccatgctggtcatgctggcaatgagatggcagaccaa
ctggccaataaaggcgttgatggttttggagatgagaccctccccaatcccatcgttcac
aatgacgaaaattttatgataaatacacccaaaccaaaacacccctatgcttacaacacc
atccaaaaccctgattatgatggtgataccagtcgtaccaatactgatttttggccaatt
ttacccaagcctgacaatcgagacgcacccgaaagacagctgatcatggatactgaaacc
acaggttttaatgaagctggtggtgatcgtatcgttgaggtcggaattgttgaattggtt
gggcgtaaattcacaggcaatattttacatgtgtacatcaatcctgaaaaacacatggat
gatgcagtcatacaagttcatggcatcagtaatgcgtttgtcgcagataagcccaaattt
gctgaagttgctcagcagatttatgagtttatggcaggcagtgaggtcattgcgcacaat
gccgcctttgatatgaaatttttaaacatggaatttaaccgtgcaggtttaagtaatttt
gcaaacagtgttaaagttaccgatacactagcactcgccaaacaaatgtaccctggtcaa
aaaaacagcttggatgccctagtaaaacggcttggcgtcggtcaaaaagatcgtaccttt
catggggcgttgcttgactcggagatcttagctgaggtgtatttggcgatgacaggcggt
caaatcgcaatggcaattgacgatgataacactggtggcagcaatactcgtagtacagga
tctgcattttacgatttatctcaatatgcagactcactggcactttctgagtctgacatt
gaggctgatgctctatggcgtgccaaggtgttatcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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