KEGG   Mycobacterium canettii CIPT 140070010: BN42_21221
Entry
BN42_21221        CDS       T02421                                 
Symbol
alkA
Name
(GenBank) Putative ada regulatory protein alkA (Regulatory protein of adaptative response) (Methylated-DNA--protein-cysteine methyltransferase) (O-6-methylguanine-DNA alkyltransferase) (O-6-methylguanine-DNA methyltransferase) (3-methyladenine DNA glycosylase II)
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
mcx  Mycobacterium canettii CIPT 140070010
Pathway
mcx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mcx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BN42_21221 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mcx03000]
    BN42_21221 (alkA)
   03400 DNA repair and recombination proteins [BR:mcx03400]
    BN42_21221 (alkA)
Enzymes [BR:mcx01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     BN42_21221 (alkA)
Transcription factors [BR:mcx03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    BN42_21221 (alkA)
DNA repair and recombination proteins [BR:mcx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BN42_21221 (alkA)
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC HhH-GPD HHH DUF6233
Other DBs
NCBI-ProteinID: CCK59386
Position
complement(1552632..1554122)
AA seq 496 aa
MHDDFERCYRAVQSKDARFDGWFVVAVVTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGE
GFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERL
LQAEVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPT
ALRARAAARFGSAAAAAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGVYRRTLR
LPWGNGVVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLR
AVVAKAPGQRIPRTVDEAEFAVRAVLGQQVSTKAASTHVGRLVAAYGRPVHDRHGALTHT
FPSIEQLADIDPGHLAVPKARRRTMSALVASLADGSLVLDAGCDWERARTQLLELPGVGP
WTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPTQRRALMAHSARWRPWRSYATQHLWT
TLEHPVNQWPPQEKIA
NT seq 1491 nt   +upstreamnt  +downstreamnt
gtgcacgacgacttcgaacgctgctaccgggcggtccagtccaaagacgcccggttcgac
ggctggttcgtcgtcgcggttgtgaccaccggtgtctactgccggccgagttgccccgtc
cggccaccgttcgcgcgcaatgtccggttcctgccgactgcggcggccgctcagggggag
ggattccgggcctgcaaacggtgccgccccgacgcctcgcctgggtctccggaatggaat
gtgcgtagtgacgtcgtggcgcgggcgatgcggctgattgccgacggaacggtggaccgc
gacggtgtcagcggcctcgcggcccagctcggttacaccattcgccagctggagcggctg
ttgcaggccgaggtcggagccggtccgctcgcgttggcccgcgcccaacgcatgcagacc
gcccgggtgctgatcgagaccacgaacctgccgttcggcgatgtcgcattcgccgccggg
ttttccagcatccgtcagttcaacgacaccgttcgcctggcgtgcgacggcacaccgacg
gcattgcgtgcgcgcgcggccgcccgattcgggtctgccgccgccgcagcggggacggtg
tcgctacggctaccggtccgtgccccattcgcctttgagggtgtttttggccatctggca
gcaaccgcggtgccgggttgcgaagaggtccgcgatggtgtgtaccgacgcacgctgcgg
ctcccatggggcaacggcgtcgtcagcctgacgccggcacccgatcatgtgcgctgcctg
cttgtgctcgatgatttccgcgacctgatgacggctactgcacgttgccgacggctgctg
gacctcgacgccgatcccgaagcgatagtcgaggcgctgggcgccgatccggatctgcgc
gcggtggtggccaaggcacccgggcaacgcattccccgcacggtcgacgaggcagaattc
gccgtccgggcggtcctcggccaacaggtatcgaccaaggccgcaagcacgcacgtgggc
agactggtcgccgcgtacggacggccggtccacgatcgccacggcgctttgacccacacc
tttccgtcgatcgaacagctcgctgacatcgatcccggccatctggcggttcccaaggcg
cgtcgacggacgatgagcgcgctcgtcgccagccttgccgacggcagtctggtgctggac
gccggatgtgactgggaacgcgcccgcacacagttgctcgagctgccgggcgtgggcccg
tggaccgcggaggtcatcgccatgcgcggcctcggtgacccggacgcctttccggccagt
gatctcggcctgcggctggccgccaaaaagctgggcctgccgacgcaacgccgagccctc
atggcgcacagcgctcgctggcgcccctggcgctcctatgccacccagcatctgtggacc
accctcgaacatccggtaaaccaatggccaccacaggagaagatcgcatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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