KEGG   Methylorubrum extorquens DM4: METDI5449
Entry
METDI5449         CDS       T00947                                 
Symbol
yjgR
Name
(GenBank) putative enzyme with nucleoside triphosphate hydrolase domain
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
mdi  Methylorubrum extorquens DM4
Brite
KEGG Orthology (KO) [BR:mdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdi03400]
    METDI5449 (yjgR)
DNA repair and recombination proteins [BR:mdi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     METDI5449 (yjgR)
SSDB
Motif
Pfam: HerA_C DUF87 FtsK_SpoIIIE AAA_22 ResIII Zot AAA_30 AAA_25 AAA_16 AAA_10 BD-FAE TrwB_AAD_bind T2SSE Hydrolase AAA_7 AAA_19 nSTAND3
Other DBs
NCBI-ProteinID: CAX27057
UniProt: C7CMR2
Position
complement(5393823..5395385)
AA seq 520 aa
MTAGEGTILVGRSTGPQPKPEVLSLRLANRHGLVAGATGTGKTVTLQVLAEGFSNAGVPV
FAADIKGDLSGLAAAGEAKPHFVKRAEELGIAYEPDRFPTIFWDVFGEQGHPIRCTVTEM
GPLLLARLLELNDIQEGVLNIAFRVADENQWPLIDLKDLRALLTFLSENAKELSATYGNV
SGASIGAIQRALLVLENQGADQFLGEPALNLEDFMRTDREGRGFVNILAADKLMQRPRLY
ASFLLWMLSELFEQLPEVGDLDKPKLVFFFDEAHLLFNDAPKALLDAVEQVVRLIRSKGV
GVYFVTQNPLDVPETVLGQLGNRVQHALRAFTPRDQRAVRAAAETFRQNPGFDVGKAITE
LAVGEALVSFLEAKGTPSVVERALIAPPQGRVGPLTPAERAAIIGQSPLRGKYDEAVDNE
SAYEMLAQRKHLDSAPTEAAGRSESGLSGMLGGWLGGIFGSGEEAPKGKGAGKGTGRTRR
PPPSLAEQVIGNAARSMARKVGTEVGDAILRNVLGGLTKR
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgacagcgggcgaggggacgattctggtcggccggagcacggggccgcaaccgaagccc
gaggtgctgagcctgcggctggccaaccgccacggcctcgtggcgggcgccaccggcacc
ggcaagaccgtgacgctgcaggtgctggcggagggcttttccaacgcgggcgtcccggtc
ttcgccgccgacatcaagggcgacctctcggggctcgccgccgcgggcgaggccaagccg
catttcgtcaagcgggcggaagagctcgggatcgcttacgagcccgaccgcttcccgacg
attttctgggacgtgttcggcgagcagggccacccgatccgttgcaccgtcaccgagatg
ggtccgctcctgctcgcccgcctgctcgaactcaacgacatccaagagggcgtgctcaac
atcgccttccgcgtcgccgacgagaaccagtggccgctgatcgacctgaaggatctgcgc
gcgctcctcaccttcctgtcggagaacgcgaaggagctgtcggccacctacggcaacgtc
tcgggcgcctcgatcggtgcgatccagcgggcgctgctcgtgctggagaaccagggcgcc
gaccaattcctcggcgagccggcgctcaatctcgaagacttcatgcgcaccgaccgggag
ggccgaggcttcgtcaacatcctggccgccgacaagctgatgcagcggccgcgcctctac
gcctcgttcctgctgtggatgctctccgagctgttcgagcagcttcccgaggtcggcgat
ctcgacaagcccaagctcgtgttcttcttcgacgaggcgcacctgctgttcaacgacgcg
ccgaaggccctcctcgacgcggtcgagcaggtggtgcgcctgatccgctcgaagggcgta
ggcgtctacttcgtgacccagaaccccctcgacgtgccggagacggtactcggccagctc
ggcaaccgggtgcagcacgcgctgcgcgccttcaccccacgcgaccagcgcgccgtgcgc
gccgccgcggagaccttccgccagaaccccggcttcgatgtcggcaaggcgatcaccgaa
ctcgccgtcggcgaggcgctggtgagttttctggaagccaagggcacgccctcggtcgtg
gaacgggcgctgatcgccccgccgcaggggcgggtggggccgctgacgccggccgagcgc
gccgcgatcatcgggcagagccccctgcgcggaaaatacgacgaggcggtcgacaacgag
agcgcctacgagatgctggcccagcgcaagcacctcgattccgccccgacggaagccgcg
ggccgaagcgaaagcggcctctcgggcatgctcggcggctggctcggcgggatcttcggc
agcggcgaagaggcgccgaaaggcaaaggggccggcaagggaaccggccgcacccgccgc
ccgccgccgagtctggccgagcaggtcatcggcaacgccgcgcgctccatggcgcgcaag
gtcggcacggaggtgggcgacgcgatcctgcggaatgtgctgggcgggctgacgaagcgg
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (24)   

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