KEGG   Malus domestica (apple): 103418978
Entry
103418978         CDS       T03194                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103418978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103418978
   03036 Chromosome and associated proteins [BR:mdm03036]
    103418978
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103418978
   Coactivators
    SAGA/TFTC/STAGA complex
     103418978
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103418978
    STAGA complex
     103418978
    TFTC complex
     103418978
    SAGA complex
     103418978
    SLIK complex
     103418978
SSDB
Motif
Pfam: TAF6_C TAF TFIID-31kDa Histone CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 103418978
NCBI-ProteinID: XP_008355317
Position
3:complement(26549999..26556996)
AA seq 531 aa
MSNVPKEAIEVVAQSIGISNLAPDVALALTPDVEYRVREIMQEAIKCMRHSRRTILTTDD
VDSALKLRNVDPIYGFASGDPLRFKRAAGHKDLFYIDDKDVEFKDVIEAPLPRAPLDVSI
TAHWLAIEGVQPAIPENASVEALAAYSDVKKSEYKEDGLPVEIKLPVKHVLSRELQLYFE
KITELTRRSSSTLFKEALVSLATDSGLHALVPYFTCFVADEVTRNLNNFPLLFALMRLVR
SLLQNPHIHIEPYLQQLMPSVITCLVAKRLGNRYTDNHWELRNFTANLVSSICKRFGHVY
HNLQPRLTRTLLHAFLDPTKALSQHYGAIQGIAALGPTVVRLLILPNLDSYMQLLEPEMI
IEKQKNEIKRQEAWRVYGALLNAAGQCMHDRLKLFHSLLSPPAHAVWKRNGKVATTMTNK
RKASTDNMMQQPPLKKLATDGAVGAMPMNSMQVDMQGAAGGFSTSVSMSHQLPKEHMLGR
EVSGKTVKGSTVLAQAWKEETNAGHLMASLFEYFGESVLSFTPKPELSFFL
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgagtaatgtgccgaaagaagcgatagaagttgtagcacagagcatcggcatttccaat
ttggcccccgatgtcgcccttgctcttaccccggatgttgagtaccgggtccgagagatc
atgcaggaggcaattaaatgcatgcggcattcgagacggactattctgactacagatgat
gtggatagtgcacttaaattaagaaacgtggacccaatatatgggtttgcctctggagat
cctttgagattcaagagagctgctggacataaggatttgttctacattgatgacaaggat
gtggaatttaaagatgtcattgaagcacctttaccaagggcacctcttgatgtatcaatt
actgctcactggctggcaattgaaggtgttcaacctgcaattccagaaaatgcttctgtt
gaagcacttgcagcgtactctgatgtcaaaaaatctgaatacaaggaagatggacttcct
gtagagattaaattgcctgttaagcatgtattgtcaagggaacttcagctttactttgag
aagattaccgagcttactcgcaggtctagttccaccctcttcaaagaagcattagtgagc
ttggcaacagattccggactccatgcgttggttccatacttcacatgctttgttgctgat
gaggttacacggaatttgaataatttccctctgctatttgctttgatgcgtcttgtccgg
agccttcttcaaaatcctcatatacatattgaaccttatctacaacaattgatgccatct
gttattacctgccttgttgcaaaaagattagggaatagatacactgacaatcactgggaa
cttagaaactttacagcaaacctggtgtcttcaatttgcaaaagatttgggcatgtttat
cacaatcttcaaccacgtttgacaaggactctgcttcatgctttcttggatccaacaaaa
gcattatctcagcattatggtgcaattcaagggatagcagctcttggtcccactgtggtt
cgtctactcatacttccaaatcttgattcgtatatgcaacttcttgagccagaaatgata
attgagaagcaaaagaatgagataaagaggcaagaagcttggcgtgtctatggggctttg
ctgaatgctgctggccaatgtatgcatgatcggctcaagctgttccatagtctgttgtct
cctccagctcatgctgtttggaaaaggaatggaaaggttgcaacaacaatgacaaataaa
cgcaaagcaagcacagacaacatgatgcaacaaccaccactaaaaaaactagctactgat
ggtgcggtgggagcaatgccaatgaactccatgcaagttgacatgcaaggagctgcaggt
ggattctccacatctgtatcgatgtcccaccagttaccaaaggaacacatgttgggaagg
gaggtcagtgggaaaacggtaaaggggtcaacagttcttgctcaggcgtggaaggaggag
acaaacgcaggacatctaatggcatcattgttcgaatattttggtgaaagcgtgttgtcc
tttacacccaaaccagagttgtctttcttcttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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