KEGG   Malus domestica (apple): 103425058
Entry
103425058         CDS       T03194                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g71420
Organism
mdm  Malus domestica (apple)
SSDB
Motif
Pfam: PPR_2 PPR DYW_deaminase PPR_1 PPR_3 E_motif PPR_long
Other DBs
NCBI-GeneID: 103425058
NCBI-ProteinID: XP_008361359
Position
5:1035397..1039381
AA seq 757 aa
MLRPCALTLASRISHRTTFTSSFTLLDVQTNYNDLLGQVRVLATRGHLQEALSLFYSLHP
PPPHCPQTYATLFHVCVRHRHLQDGLSLHRYMIAHNPIHPPDLFVTNHLINMYAKFGHLD
YAHQLFDGMPRRNLVSWTALISGYALCGQPQKCLSLFAGMLVHHRPNEFSFTSVLSSLAE
SDGVYGRQVHALALKMSLDACVYVANALITLYSKICNPGGVYDASKDEAWNVFKSMEFRN
LISWNSMIAGYRYLGLGAQAIHLFIQMYRDGIGFDRATLLSVLSSLCRSNGLDDNVVSKF
CFQLHCLTIRTGLILKIEVATALVKAYSDLGGDVADCYRLFLETSCDRDIVAWTGIITTF
AERDPEEALFLFRQLHRENLVPDRYTFSIVLKAYASLATERHALAVHSQVIKAGFECDTV
LANALIHAYARCGSISLSKKVFDGIELRDVISWNTMIKAYALYGQATEALHLFSRMNVQP
DPATFVSLLCACSHAGLVEEGTRIFDSMIEVYGIVPQLDHYACMVDILGRAGQIVEAEEL
LSRMPMEPDSVVWSALLGSCRKHGRTLLAKLVADRLKELAPEDSLGYVQMSNMYCSDGKF
GEAGLIRKEMKGSRVKKEPGLSWIEIGNQVHEFCSGGQHHPERNIIFRNLEELIVRLREM
GYVPDTSLSVHDVEEEHKEELLYHHSEKLALVFAIMNEGSSNCGRTAIKIMKNIRICVDC
HNFMKLASNLLQKEIFVRDSNRFHHFNDGICSCNDYW
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgttacgcccatgtgctctcaccctcgcgtctcgcatctctcatcggacaaccttcacc
tcatctttcaccctgctcgacgtgcaaaccaattataatgatctgctcggtcaggtgcgg
gttctcgccacccgcggccatctccaggaagcgctctcactcttctactcccttcatccc
ccaccacctcactgcccccaaacctacgccactctcttccacgtctgtgtccgccaccgc
cacctccaagacggcctctctttgcaccgctacatgatcgcccacaaccccatccaccca
cccgacctctttgtcaccaaccacctcatcaatatgtatgccaaatttggtcacttggac
tacgcccaccaactgtttgatggaatgcccaggagaaaccttgtctcttggaccgctctc
atttccgggtacgccctatgcgggcaaccccaaaagtgtttgagtttatttgctggcatg
ttggttcaccaccgccccaacgaattttctttcaccagcgtgctcagctcgctcgcggag
agtgacggtgtttatggtcggcaggtacatgcgcttgctttgaaaatgtctttggatgct
tgtgtttacgttgcaaatgctcttattactctgtatagcaagatttgtaatcctggaggt
gtttatgatgctagtaaagacgaggcgtggaatgtgtttaagagcatggagttccggaat
cttatatcttggaattcaatgattgcagggtaccggtatctcggacttggagctcaagct
attcatcttttcatacaaatgtaccgtgatggaattgggtttgatcgtgccacacttctc
agcgttctctcatccttatgcagaagcaatggccttgatgataatgtggtttctaagttt
tgtttccaattgcactgtctcacgatcagaaccgggcttatattaaaaattgaagttgcc
actgcgttagttaaagcttattcagatcttggaggagatgttgcggactgttacaggctt
ttcttggagacaagttgtgatcgggatattgttgcgtggactggcatcataacaactttt
gcagagcgagaccctgaagaagcactcttcctctttcgtcaattgcatcgtgagaactta
gttcccgacaggtatactttctcaattgttttgaaagcttatgcaagccttgcaaccgag
cgccacgccttggcagttcattcacaagtgatcaaagctggctttgagtgtgacacagta
cttgcaaatgccttgatccatgcctatgctaggtgtggctctatttccttgtctaagaaa
gtgtttgatggaattgaacttcgtgatgtcatttcgtggaatacaatgattaaggcttat
gccttgtatggacaagctacagaggcattgcatctcttctcacgtatgaacgtccaacct
gatcctgccacctttgtttctctcctctgtgcttgtagccatgctggactggtagaagaa
ggaactcgcatctttgactccatgattgaggtatatggtattgtacctcaacttgatcat
tacgcctgcatggttgatattcttggtcgagctggacaaattgttgaggctgaggagctt
ctaagtcgaatgccaatggagcctgattctgtagtctggagcgcactccttggttcatgt
agaaagcatggaagaacactgttggccaagttagtagcagatcgactgaaagagctagcg
ccagaggattcattaggttatgtacaaatgtcaaacatgtattgctctgacggtaaattt
ggtgaagcaggcctaattaggaaggaaatgaaagggtctagagtgaaaaaggaacctgga
ttaagctggattgagattggaaatcaggtccatgagttttgctccggaggccaacatcat
ccagaaaggaacattatcttcaggaatctagaagaactgattgtgcggttaagggaaatg
ggttatgttccagacacaagcttgtcagtgcatgatgtggaagaggaacacaaagaggag
ctgttgtaccatcatagtgaaaagctagctttagtgtttgctattatgaatgaaggtagt
tcaaattgtggtcggactgctataaaaataatgaagaacataagaatctgcgtggactgc
cataacttcatgaagttagcatcaaatctacttcagaaagagatttttgtgagagactca
aaccggttccaccactttaatgatggaatatgctcttgcaatgactactggtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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