KEGG   Malus domestica (apple): 103429993
Entry
103429993         CDS       T03194                                 
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-1-like
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103429993
Enzymes [BR:mdm01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     103429993
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    103429993
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 103429993
NCBI-ProteinID: XP_028944315
Position
11:complement(11264544..11274887)
AA seq 246 aa
MGPRWKGKGAEAKALADPMSKIVLKLQSSLIQSDARGILCGSSVLLAAEEEQALLFGRAY
FGHPIVNADKDRQWFQLGMEEAFFLCYSLKCLKIAGEDKRPKDDQELWQCMKSKKAGFPV
FYKAYSHLRTKNWVVRPGLQYGADFVAYRHHPSLVHSEYAVLVSSEGDAEANGRLKVWSD
VHCTLRLCLGVVKTLLVLTISKNGDDDASPSCLANYTVDELTVTRWSPEQSREEDTTDNE
ESQATE
NT seq 741 nt   +upstreamnt  +downstreamnt
atggggcctagatggaaaggaaaaggcgcagaagctaaagcacttgcagatccaatgtca
aagatagtattgaagcttcagtcttctcttatccaatcagatgcccgaggaatcttatgc
gggagcagcgtacttcttgctgcagaagaagaacaagcccttctcttcggccgtgcctac
tttggccacccgattgttaatgccgataaggataggcagtggtttcagttgggcatggaa
gaggcatttttcctgtgctattctttaaaatgcctcaagatagcgggcgaagacaaacgc
ccgaaggacgatcaagagctttggcagtgcatgaagtccaaaaaagcgggatttcctgta
ttttacaaggcgtattctcaccttcgaacgaaaaactgggttgtgagacccggacttcaa
tatggtgcggactttgttgcttaccgtcaccatccgagtttggtccattctgaatatgct
gtgcttgtgtcatcagaaggagatgctgaagcaaatgggcgactgaaggtgtggtctgat
gttcattgcaccttaaggctttgtttaggtgttgtaaaaacattgctagttcttactatt
agtaagaatggggatgatgatgcctctccgtcatgtttggcaaactacacggtcgatgag
ctcacagttacaagatggagtccagaacaaagccgcgaggaagatacaacggataatgag
gaatcacaagcaacagagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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