KEGG T03194: 103455880

Malus domestica (apple): 103455880

Entry

103455880         CDS       T03194

Name

(RefSeq) WD repeat-containing protein PCN-like

K14548

U3 small nucleolar RNA-associated protein 4

Organism

mdm Malus domestica (apple)

Pathway

mdm03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103455880
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103455880
Ribosome biogenesis [BR:mdm03009]
Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103455880

SSDB

Motif

Pfam:

WD40 ANAPC4_WD40 Pep3_Vps18

Other DBs

NCBI-GeneID:

103455880

NCBI-ProteinID:

XP_008393715

Position

15:4683951..4689143

AA seq 824 aa
MSEAYRTSSVDWKPSPLVALATSVDDSQVAAAREDGSLEIWLVSPGSVGWHCQLTIHGDP
ESRVSSLIWCRAGSKGLPCGRLFSSSINGSVLQWDLFHLKQKTVLDSIGVSIWQMAVAPC
SSDIESKDYPIGNGCLKANSTEGGDPETSDSEDDSDSAEINEQSVVEDQLVALACDDGCV
RIYSITKTDEFVYTRSLPRVSGRVLSVTWSPDTKFIYSGSSDGMIRCWDAKLGHEIYRIT
VGLGGLGSGPELCVWSLLSLRCGNLVSADSTGSVQFWDSQHGTLLQAHSYHKGDVNALAA
APSHNRVFSAGSDGQVILYKLSSVTVGSSDDKSSSELLKKWIYVGLVKAHTHDVRALTVA
VPISREDPLPDEGIKIHRKERRKITRNNINEFSYRKWAHLGVPMLISAGDDTKLIAYPVK
EFTQFKPHDICPAPQRLPIQLVLNRTSKQSLLLVQASSWVDILLVRAQSGTFSKIAPVSK
WGQASTDLLVRVKSKAYRKIICSTISNTGVLFAYSDHVKPSLYELKKNKVGKSALTVNKR
QLPQKLPFAHSMVFSSDSSRLMIAGHDRRIYVVDVSREELVHRFTPCRDLQDQELPPSEP
PITKLFTSCDGQWLAAINCFGDIYVFNLEIQRQHWFISRLNGASVTAGGFSPRNNNVLVI
TTSSNHVYALDVEERELGNWSRQHTYCLPKKFQEFPGEVIGLSFPPSSSSSAVIVYSARA
MCWIDFGKPIDPDDESGMPNGQNPTSMNLQSSNSIKKILKRKLTDSETESRLMAMKNFDF
IWFPSPALFLGHLSNSSLLMIDKPWMEVVKSLDSAPVHRHVYGT

NT seq 2475 nt +upstreamnt +downstreamnt
atgtctgaagcttacaggaccagctccgtcgattggaagccctctcccttggttgcccta
gccaccagcgtcgacgactcccaagtcgccgctgctcgcgaggatggctccctcgagatt
tggctcgtctcccccggctccgtcggctggcactgtcagctgacgattcatggcgatcct
gaatcgagagtatcgtcgcttatttggtgtcgtgccggctcgaaaggattgccttgtgga
cggttgttttcctcgagcatcaatggttcagttttgcagtgggatcttttccatttgaag
cagaagaccgtgttggattctattggggtctcgatctggcaaatggctgttgcaccatgt
agtagtgatatagaatcaaaggactaccctattggaaatgggtgtttaaaagctaatagt
accgaggggggtgatccagaaacaagcgatagcgaagatgattccgactccgctgagatt
aatgaacaatcagttgttgaggaccagcttgtggcattagcttgtgatgatggttgtgtg
cgaatatacagtattactaaaacagatgagtttgtttacactagatcgttgcctagggtc
agtggacgtgtcttgagtgtgacatggagtcctgatactaaatttatatattcggggagt
agtgatgggatgataagatgctgggatgctaaattgggccatgaaatctataggattaca
gttgggcttggaggtctgggaagtggacctgaactttgtgtttggtcgttactttctctg
aggtgtgggaaccttgtcagtgcagacagtactggcagtgttcagttttgggacagtcag
catggaactctattgcaggcacattcgtaccacaaaggtgatgtaaatgctctggcagca
gcccccagccataatagggtgttttccgctggttctgatggtcaggttattctttataag
ctctctagtgtgacggtgggatctagtgatgacaagtcttcttctgagttattgaagaaa
tggatctatgttggtcttgtaaaagctcatacacacgatgttagggctttgacagtggct
gtaccaatcagcagagaagatcccttgccagatgaaggtataaaaatacaccgtaaagaa
cgtcgtaagataacgcgtaataatattaatgagtttagttatcgtaaatgggcacatttg
ggtgttcccatgcttatatctgctggtgatgacacaaagttaatcgcatatcctgttaag
gagttcacacagtttaaacctcatgatatctgccctgcgcctcagagactaccaattcaa
ctggtgcttaatagaacatccaaacagtcattgcttcttgtacaagcttctagttgggtg
gatattcttcttgtacgtgcacaaagtggcaccttttccaagatagctcctgtctccaaa
tggggccaagcctcaacagatcttttggttcgagtcaagagtaaggcatatcggaagatc
atttgcagcacaatttctaatacgggagtgctttttgcatattctgatcatgtgaaacct
agcctatatgaactgaagaagaataaagttggcaaaagtgcactgactgttaataaaaga
cagcttccacagaaactaccatttgcccattccatggtttttagttctgattcttctcgc
ttgatgatagctgggcatgatagaagaatatatgttgtggatgtgagcagagaagaacta
gtgcacaggttcaccccttgtcgcgatttgcaggatcaagaattaccacctagtgagcct
cccataacaaaactgttcaccagttgtgatgggcagtggttggctgccatcaactgcttt
ggagatatttatgtatttaatctggagatacaaaggcagcactggttcatttcaagacta
aatggcgcatctgtgacagctggtggtttttctcctcgaaacaacaatgtgcttgtaatc
acaacctcttcaaatcatgtatatgcattggatgttgaggagagagaactgggaaactgg
tcgaggcagcatacgtattgtctaccaaagaaattccaagaatttccaggcgaagttatt
gggctctctttcccaccctcctcaagttcatctgctgttattgtttacagtgccagggca
atgtgctggattgattttgggaagcccattgatccagacgatgaaagtggcatgccaaac
ggtcagaatccgacatcgatgaatttgcaaagtagtaattcgattaagaagattctaaaa
cgtaaattgacagacagtgaaactgagagtagacttatggctatgaagaattttgatttt
atttggttcccaagtccagctttatttttgggtcatctttcgaatagttctctgttgatg
atagacaaaccgtggatggaagtggttaaatcgttggactctgcacctgtacacagacat
gtttacgggacataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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