KEGG   Monodelphis domestica (gray short-tailed opossum): 100009927
Entry
100009927         CDS       T01031                                 
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes 1A
  KO
K06636  structural maintenance of chromosome 1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04110  Cell cycle
mdo04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100009927 (SMC1A)
   04114 Oocyte meiosis
    100009927 (SMC1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mdo03036]
    100009927 (SMC1A)
Chromosome and associated proteins [BR:mdo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    100009927 (SMC1A)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    100009927 (SMC1A)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 AAA_29 SlyX
Other DBs
NCBI-GeneID: 100009927
NCBI-ProteinID: XP_001362224
Position
8:126402388..126406880
AA seq 1233 aa
MGFLKLIEIENFKSYKGKQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAAVSMVYSEDSGEDRTFARIIVGGSSEYKINNKVVQLLEYSQE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEMEIEKLNK
ELTSKNKEIDKEKKRMDKVEEELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKQYKKRKGDMDELEKEMVSVEKARQEFEDRMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVKLAKQRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQGREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLAKGTMDDISQEEGSSQGE
ESGSGSQRTSNIYAREALIEIDYSDLCEDLKDAQAEEEIKQEMNTLQQKLTEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKHAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEQGDCVISKVLTFDLTKYPDANPNPNEQ
NT seq 3702 nt   +upstreamnt  +downstreamnt
atgggctttctaaaattgatcgaaatcgagaatttcaaatcgtacaagggtaagcagatc
atcgggccttttcagaggttcacagccattatcgggcctaacggctcagggaagtcgaat
cttatggacgctatcagtttcgtgctgggtgaaaagacaagcaatttgcgtgtaaagacc
ttgagggatctgatccatggggcccccgtgggcaagcctgccgccaatcgtgcagcagtc
agcatggtgtattctgaggacagtggtgaagaccgcacttttgcccggataattgtgggg
ggctcttcagaatacaaaatcaataacaaggtagtccagctacttgaatacagccaggag
ctggagaaactgggtatcctcatcaaagcccgaaacttcctggtgttccagggtgctgta
gagtctatcgctatgaagaaccccaaggagcggacagccttgtttgaggagattagccgc
tcaggggaactggcccaggaatatgataagcggaagaaggagatggtaaaggctgaagaa
gatacccagtttaattaccaccgaaagaagaatattgcagctgagcgtaaagaagccaag
caagagaaagaggaggctgaccgataccagaggctgaaagatgaggttgttcgtgcacag
gtgcagctgcaactgttcaaactgtatcacaatgaaatggagattgagaaactaaacaag
gaactcacttccaagaacaaagagattgacaaggaaaagaagcggatggacaaagtggaa
gaagagctaaaggaaaagaagaaagagctgggcaagatgatgcgggagcagcagcaaatt
gagaaggagataaaggagaaagactcagagcttaaccagaagcggccccaatacattaaa
gccaaggaaaatacttcacacaaaattaagaaactggaagctgccaaaaagtctctacag
aatgcccagaaacagtataagaagcgaaaaggagatatggatgaacttgaaaaagaaatg
gtatcagtagagaaggcaagacaagaatttgaagatcgaatggaggaagagagccagagc
caggggcgggacctgactctggaggaaaaccaagtaaagaagtaccacaggctgaaggag
gaagccagtaaaagagcagccaccttggcccaggagctagaaaaattcaatcgtgaccag
aaggctgaccaagaccgactggacttagaggagcgaaagaaagttgagactgaggccaag
atcaaacagaaactgagggaaattgaagagaatcaaaagcgaattgagaaactggaagaa
tacatcaccaccagcaagcagtctctggaggaacagaaaaaactagagggagaactaact
gaggaggttaagctggctaaacagcgcattgatgaaatcaacaaggagctgaatcaagtg
atggagcaacttggtgatgccagaatagaccgacaggagagcagcagacagcaaagaaag
gcagagataatggagagtatcaaacgcctctaccctggttctgtttatggccgtctcatt
gatctatgccagccaacacagaagaagtaccagattgctgtaactaaggtgctgggcaaa
aatatggatgccatcattgtggactctgagaaaactggccgggactgtattcaatacatc
aaggaacagcgtggggagcctgagaccttcttaccacttgactacctagaggtgaaacca
acagatgagaagcttagggaactgaagggggccaagctggtaattgatgttattcgctat
gagccaccacacatcaagaaggctctacagtatgcctgtggcaatgctctggtatgtgac
aatgttgaagatgcccgccgcattgcttttggtggccaccagagacataagacagttgca
ctagatgggacactcttccaaaagtctggtgtcatctctgggggagcaagtgacctcaaa
gccaaggcccgccgatgggatgagaaagcagttgacaaactgaaggagaagaaagagcgc
ctcacggaggagctgaaggaacagatgaaagctaagaggaaggaggctgagctgaggcag
gtacagtctcaggctcatggcttacaaatgaggctcaagtactcccagagtgacctggaa
cagacaaagacccggcaccttgcacttaacctacaggaaaagtccaagctagagagtgag
ctagctaattttggaccccgtatcaatgacatcaaaaggatcatccagggccgggaacga
gagatgaaagatttgaaggaaaagatgaaccaggtagaagatgaggtatttgaggagttc
tgccgagaaattggagttcgcaatattcgtgaatttgaggaagagaaagtaaagcggcaa
aatgaaatagccaagaaacggcttgagtttgagaaccagaagactcgcctgggtattcag
ctagattttgagaaaaaccagctaaaagaggaccaggataaggttcatatgtgggagcag
acagtaaagaaggatgagaatgaaattgaaaagctcaaaaaggaggagcagagacacatg
aaaataatcgatgaaaccatggcccagctacaggaccttaagaaccagcatctggcaaag
aaatctgaagtcaatgacaaaaaccatgagatggaggagatccgaaaaaagttgggtggg
gccaacaaagaaatgacccacttacaaaaggaggtaaccgctattgagacaaagttagag
cagaagcggagtgaccggcacaatctgttgcaggcctgcaagatgcaggacatcaagctg
cccctggccaaaggcaccatggatgacattagtcaagaagaggggagctcccaaggggag
gagtctgggagtggctctcaacgaacctccaatatctatgcccgtgaggccttgattgag
attgactacagtgacctctgtgaggacctcaaagatgctcaggctgaagaggagattaaa
caggagatgaacacattgcagcaaaaactgactgaacagcagagtgtgctgcagcgcatt
gcagcacctaacatgaaagccatggaaaaactggagagtgtgcgggacaagtttcaggag
acatcagatgagtttgaggcagctcgaaagcgggccaaaaaagctaagcatgcctttgag
cagattaagaaggaacgctttgatcgcttcaatgcctgttttgagtctgtggctaccaac
attgatgagatctacaaagccctgtcccgaaacagcagtgctcaggccttcttggggcct
gagaacccagaggaaccctacctagatgggatcaattacaactgtgtagcccctggcaaa
cgcttccgacccatggacaacctgtctggtggggaaaagactgtagcagctcttgctttg
ctttttgccatccatagctacaaaccagctcctttctttgtcctagacgagattgatgct
gcattagataacaccaatattggcaaggttgccaactatataaaagaacagtcaacttgc
aactttcaagctattgtcatttcactgaaggaagaattttatacgaaggccgagagtctg
attggtgtctatcctgagcaaggggactgtgttatcagcaaggtactgacatttgacctt
accaaatacccagatgccaaccccaaccccaatgagcagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (57)   

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