KEGG   Monodelphis domestica (gray short-tailed opossum): 103099906
Entry
103099906         CDS       T01031                                 
Symbol
SEH1L
Name
(RefSeq) SEH1 like nucleoporin
  KO
K14299  nucleoporin SEH1
Organism
mdo  Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo03013  Nucleocytoplasmic transport
mdo04150  mTOR signaling pathway
mdo05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mdo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103099906 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    103099906 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103099906 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdo03019]
    103099906 (SEH1L)
   04131 Membrane trafficking [BR:mdo04131]
    103099906 (SEH1L)
Messenger RNA biogenesis [BR:mdo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103099906 (SEH1L)
Membrane trafficking [BR:mdo04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    103099906 (SEH1L)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Mito_fiss_reg
Other DBs
NCBI-GeneID: 103099906
NCBI-ProteinID: XP_007487808
Ensembl: ENSMODG00000021421
UniProt: A0A5F8GFA8
Position
3:281136821..281153976
AA seq 426 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDNSPNISAKVQIYEYNENTRKYAKAESLMTVTDPVHDISFAPNLGRSFHILAV
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSSQQGISNASLGSNNPNLQNSLNGSSASRYF
FPPLDSPRAGSRWSSYAQILPPPPPPPPPPLIEHSCDADTANLQYPHPRRRYISQPLNPL
PENEGV
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgttcgtggcgcgcagtatcgcggcggatcacaaggatctcatccacgatgtgtctttt
gatttccacgggcggcggatggcgacttgctccagtgaccagagtgtaaaggtctgggac
aaaagtgaaagtggggattggcattgcaccgctagctggaagacacatagtggttctgtg
tggcgtgtgacatgggcacatcctgaatttggacaggttttggcttcttgttcttttgac
agaactgctgctgtttgggaagaaatagtgggagagtccaatgataaacttcgaggacag
agtcattgggttaagaggaccactttggtcgatagcagaacatcagttactgatgtgaag
tttgctcctaaacatatgggtcttatgttagcaacctgttcagcagatggtgtggtgaga
atatatgaagctccagatgttatgaatcttagtcaatggtcattgcagcatgaaatctca
tgtaagctaagctgtagttgtatttcatggaatccttcaagttctcgtgctcattccccc
atgatagccgtaggaagtgatgacaatagtccaaatatatctgctaaggttcagatttat
gaatataatgaaaataccaggaaatatgcaaaagcagaatcccttatgacagtcactgat
cctgtacatgatatctcatttgcaccaaatttgggtcgatcattccatatcctagcagta
gcaaccaaagatgtgaggattttcacgctaaaacctgtaaggaaagaattaacttcttct
ggtggtccaacaaaatttgagattcatatagtagctcaatttgataatcacaactctcag
gtttggcgagtgagttggaatataacaggaacagtactagcatcatctggagatgatggc
tgtgtaagattgtggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagcccagtcaatgggagctcttctcaacagggaatctcaaatgcttcttta
gggtcaaataatccaaatctacaaaattcactaaatggatcttcggctagcaggtatttc
tttccccctctggattccccacgggctggatcgagatggtccagttatgcccagatcctt
cctcctcctcctcctcctcctcctcctcctctgatagaacactcttgcgatgctgacact
gccaacctccagtatcctcaccctcgcagacgatatatctctcagcctcttaatccctta
cctgagaatgaaggggtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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