KEGG   Mycobacterium dioxanotrophicus: BTO20_07025
Entry
BTO20_07025       CDS       T05102                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
mdx  Mycobacterium dioxanotrophicus
Pathway
mdx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BTO20_07025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdx03400]
    BTO20_07025
Enzymes [BR:mdx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BTO20_07025
DNA repair and recombination proteins [BR:mdx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BTO20_07025
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_30 UvrD_C_2 PDDEXK_1
Other DBs
NCBI-ProteinID: ART68362
UniProt: A0A1Y0BZN5
Position
complement(1471833..1475105)
AA seq 1090 aa
MKVFDLLGPLPSPNTTTVLEASAGTGKTFALAGLVTRLVAEGAATLDQMLLITFGRAASQ
ELRERVRDQIVCALAALTDPARARNDLETYLIAEDQDARRQRLRDALAGFDAATIATTHQ
FCQIVLKSLGVAGDSDSGVTLVESLDELVCEIVDDLYLSRFGAQKDHPLLDYAAALRLAR
TVVGNPATELRPTDPDPDSAATVRLSFARDVLAELEIRKRRRGVLGYDDLLTRLATALQP
EDSPARVRMHQRWPIVMVDEFQDTDPVQWQVIERAFSGHSTLILIGDPKQAIYAFRGGDI
DTYLRAAATAGDKQTLGTNWRSDSALVDRLQVVLRGAQLGGSDIVVHEVEAHHQGHRLAG
APHNDPFRLRVVGRNGKDAKTIPIDRLRTHIGRDLAADIGALLTSGATFEGRPVQAHDIA
VITETHKDARACHTALLTAGIPAVYTGDSDVFNSEAAEDWLYLLEAFDQPHRTGLVRAAA
ATMFFGETAESLAAGGDALTDRIADTLRTWAGQARERGVAAIFEAAQLAGMGRRVLSWQG
GERLMTDLAHMTQLLGDTAHREGFGLPALRDWLRTQRSEGGGETERNRRLDSDAAAVQIM
TVWVSKGLQYPIVYLPFTFNRYVPEPDLILFHDDGVRCLHIGGGDLSSSRAGHDPAVARA
GRAEAAADDSRLTYVAMTRAQSQVVAWWAPSRDEPNGGLSRLLRGRRPGESAVPDKCTPV
KIGDADALDRLRAWEAAGGPVIEESVVEGFTPVPTPAPAEHLATRHFHRAIDTSWRRTSY
SGLLRAADDPGVTSEPEVTELDDEVNVVDDVLAVPTVAGSDVPSPMAQLPTGAAFGSLVH
AVLETADPFAADLGAELAAQVREHAARWPVEVGSDELAAALVPMHDTPLGPLAPGVTLRQ
IALRDRLRELDFEFPMAGGDLRAGTFARLSDVGALLSTHLPANDPMASYAQRLSGGVLGN
QPLRGYLSGSVDAVLRIGSRFVVVDYKTNWLGTGDAELTAADYTRDRMAEAMLHSDYPLQ
ALLYSVVLHRFLRWRLPGYDPATHLGGVMYLFVRGMCGAATPVVDGHPAGVFSWEPPAAL
VVAVSELLDA
NT seq 3273 nt   +upstreamnt  +downstreamnt
gtgaaggttttcgatctgctcgggccactgccgagccccaacaccaccacggtgctcgaa
gccagcgccgggaccggtaagacgttcgcgctggccggtctggtcacccgtctggtcgcc
gagggcgccgcgacgctcgatcagatgctgctcatcacgttcggccgggccgccagccag
gaactgcgggagcgggtccgcgatcagatcgtctgcgccctggccgcattgactgatccc
gcccgggctcgcaatgatctggagacctacctgatcgccgaggatcaggatgcccgcaga
caacggctgcgcgacgctctggccggattcgacgcggcgaccatcgccaccacccatcag
ttctgccagatcgtgctgaaatcccttggcgtcgccggtgacagcgactccggggtgacg
ctggtggagagccttgacgagctggtctgcgagatcgtcgacgacctgtacctgtcccgc
ttcggcgcccagaaagatcacccgctgctggattacgccgccgcgctgcgactggcgcgc
accgtggtggggaatccggccaccgagctgcggcccaccgatcccgacccggattcagct
gccaccgttcggctgagcttcgcccgggatgtgctggccgagttggagatccgcaagcgg
cgtcgcggcgtgctgggctacgacgatctgctgacccggttggccaccgcgctgcaaccg
gaagactcaccggcccgggtccgcatgcatcagcgctggcccatcgtcatggtcgacgaa
ttccaggacaccgacccggtgcagtggcaggtgatcgaacgggccttctccgggcactcc
acgctgatactgatcggtgaccccaagcaggccatctacgcgttccgcggcggggacatc
gacacgtacctgcgggccgccgcgaccgccggggacaagcagacgctgggcaccaactgg
cgcagcgacagtgccctggtggaccgtttgcaagtggtgttgcgcggtgctcagctgggc
ggctccgacatcgtggtccacgaggtggaggcccaccaccagggccaccggttggccggt
gcaccgcacaacgacccgttccggctaagggtggtgggccgaaacggcaaggacgccaag
accattccgatcgaccggctccgcacccacatcggccgagatctggccgccgatatcggg
gcactgttgaccagcggggccacgttcgagggcaggccggtgcaggcccacgacatcgct
gtcatcaccgagacccacaaggacgcccgggcctgccacaccgccttgctgacggccggg
atcccggcggtgtacaccggggactccgatgtgttcaactccgaggccgccgaggattgg
ctgtatctgctggaggcgttcgaccagccgcaccgcacggggctggtgcgcgcggccgcg
gccaccatgttcttcggtgagactgccgaatcccttgccgcgggcggggacgcgctgacc
gaccggatcgccgacaccctgcgcacatgggccgggcaggcgcgcgaacgcggggtcgcg
gcgatcttcgaggccgcccagctggccgggatgggccgccgcgtgctgtcctggcagggt
ggcgagcgattgatgaccgatctcgcgcatatgacccaactgctgggcgacaccgcccac
cgggaagggttcgggctgcctgcgctccgggactggctgcgcacccaacgctccgagggc
ggcggtgaaaccgagcgcaaccgccgcctggacagcgacgccgcggccgtgcagatcatg
acggtgtgggtcagcaaggggctgcagtacccgatcgtgtatctgccgttcacgttcaat
cgctatgtgcccgaaccggatctgatcctcttccacgacgacggcgtgcggtgtctgcac
atcggaggaggtgatttgtcctcctcgcgtgcgggccacgatccggcggtggcccgggcc
ggccgcgccgaggccgccgccgacgacagcaggctgacctacgtcgcgatgacccgggcc
cagtcccaggtggtggcgtggtgggcgccgtcacgcgacgaacccaacggcgggttgtcg
cggctgctgcggggccgcaggcccggcgagtcggcggtaccggacaagtgcacgccggtc
aagatcggtgacgccgacgcgctggaccggctgcgggcgtgggaggccgcgggcggcccg
gtgatcgaggagtccgtcgtcgaggggttcacccccgtaccgacacccgcgccggccgag
cacctggccacccggcattttcaccgcgccatcgacacctcgtggcggcgcacgtcgtac
tccggcctgcttcgtgcagccgatgatccgggtgtcaccagcgagcccgaggtcaccgaa
ctcgacgacgaggtcaatgtcgtcgacgatgttctcgcggtgcccaccgtcgccggcagc
gatgtcccgtctccgatggcccagctgccgaccggcgcggcgttcgggtccctggtgcac
gcggtactggagaccgccgacccgttcgccgccgacctcggcgccgaattggccgcccag
gtgcgggagcacgcggcgcgctggcccgtcgaggtcgggagcgacgagttggccgccgcg
ctcgtccccatgcacgacactcccctgggcccgctggcgcccggcgtgacgctgcgtcag
atcgcgctgcgagaccggttgcgggaactggacttcgagttcccgatggccggtggcgat
ctgcgggccggcacgttcgcccggctctcggatgtcggcgcactgctgagcacgcatctg
cccgctaacgatcccatggcgtcctacgcccagcggttgtccggcggtgttctcggcaac
cagccgctgcgcggatacctgtcgggttcggttgatgcggtgctgcgcatcggatcccgg
ttcgtggtggtggattacaagaccaactggctgggcaccggcgacgccgaactgaccgcc
gccgactacacccgcgaccgcatggccgaggccatgctgcattcggactatccgctgcag
gcgctgctgtacagcgttgtgctgcaccggttcctgagatggcgattacccggttacgat
ccggcgacgcacctcggcggggtgatgtacctgttcgtccgtggcatgtgcggggccgcg
acgcccgtcgtggacggccatccggccggggtgttcagttgggagccgccggccgcgctc
gtggtcgcagtgtcggagttgctcgatgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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