KEGG   Mycobacterium dioxanotrophicus: BTO20_27970
Entry
BTO20_27970       CDS       T05102                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mdx  Mycobacterium dioxanotrophicus
Pathway
mdx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mdx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BTO20_27970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdx03021]
    BTO20_27970
   03400 DNA repair and recombination proteins [BR:mdx03400]
    BTO20_27970
Enzymes [BR:mdx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BTO20_27970
Transcription machinery [BR:mdx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BTO20_27970
DNA repair and recombination proteins [BR:mdx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BTO20_27970
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 DUF6327
Other DBs
NCBI-ProteinID: ART71872
UniProt: A0A1Y0C9T9
Position
complement(5773703..5774755)
AA seq 350 aa
MLISQRPTLSEETVAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEVELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLILDVETKNSISPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIDDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPATFDPSEVAGYDAATGTWTSDAGYDLDTDQDFAETEQL
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgctgatttctcagcggccaaccctgtccgaagagaccgtcgccgagaaccggtccaag
ttcgtcatcgaaccgctggagcccggtttcggttacaccttgggcaactcgctgcggcgc
acgctgctgtcgtccattccgggcgcagcggtcaccagcatccgcatcgacggtgtgctg
catgagttcaccaccgtccccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagggcctggtcgtgtcctctgaggaagacgagccggtcaccatgtacctgcgcaagcag
gggccgggtgcggtcaccgccggtgacatcgtgccgccggccggtgtgacggtgcacaac
cccgacatgcacatcgcgaccctcaacgacaagggcaagctggaggtcgaactcgtcgtc
gagcgtggccgcggctacgtcccggccgtgcagaacaaggcctcgggtgccgagatcggc
cgtatcccggtcgactccatctacagccccgtgctgaaggtgacctacaaggtggaggcc
acccgtgtcgagcagcgcaccgacttcgacaagctgatcctcgacgtcgagaccaagaac
tcgatcagcccgcgtgacgccctggcgtcggcaggcaagaccctggtcgaattgttcggt
ctggcacgcgaactcaacgtcgaggcggaaggcatcgagatcgggccgtcgcccgccgag
gccgaccacatcgcgtcgttcgccctgccgatcgacgatctggatctgaccgtccggtcg
tacaactgcctcaagcgcgagggtgtgcacaccgtgggtgagctggtggcccgcacggag
tccgatctgctggacatccgcaacttcggccagaagtccatcgacgaggtgaagatcaag
ctgcaccagctgggtctctcgctcaaggacagcccggccaccttcgatccgtccgaggtc
gccggttacgacgccgcaaccggaacctggaccagcgatgccggctacgacctggacacc
gaccaggacttcgccgaaaccgaacagctctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system