KEGG   Methylorubrum extorquens AM1: Mex_1p4247
Entry
Mex_1p4247        CDS       T00921                                 
Symbol
xseA
Name
(GenBank) putative exonuclease VII, large subunit OB-fold nucleic acid binding domain
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
mea  Methylorubrum extorquens AM1
Pathway
mea03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Mex_1p4247 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mea03400]
    Mex_1p4247 (xseA)
Enzymes [BR:mea01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Mex_1p4247 (xseA)
DNA repair and recombination proteins [BR:mea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Mex_1p4247 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB Gly_transporter
Other DBs
NCBI-ProteinID: ACS41884
UniProt: C5B267
Position
4334114..4335685
AA seq 523 aa
MPLVPPPRPATSAAAVPPPGEPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGE
ITGYRGPHGSGHAYFSLKDGSAKIDAVVWKGVLGRLRQKPKEGLEVIATGKITTFAGKSS
YQIVIDSMEPAGIGAWMALLEERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIR
DILHRLEDRFPRPVLVWPVRVQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGS
IEDLWAFNEEAVVRAAAESEIPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAE
LAAQVHELGARQAGTMLRRIERERADFRALVRAIPGADAFLAVKRQRLDLADARLRPALA
ANARDSRERLNRVADRLTRRSPAIALAEARARLAAIDHRPRTAMSRIVERRRDRLDALTS
LLGALSYKAVLARGYALVRDADGLPVRSADAAARAARFQLQFADGALFARPEEAPDDPVA
PPLVEAPRSAPRPKRAPRRAAPEPAPKPEKAAAEPAARQGSLF
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgccgctcgtgcccccgccacgtcctgcgacctctgccgccgccgtgccgccgccgggg
gagccggcgccctcggcgctgctccaggccaacacccccgaatggtcggtcggcgatctc
gccgccgccctgaagcgcaccctggaggacgctttcgggcatgtgcgtctgcgcggcgag
atcaccggctatcgcgggccgcacggctcgggccacgcctacttctcgctgaaagacggc
tcggcgaagatcgacgcggtggtgtggaagggcgtgctcgggcgcctgcgccagaagccc
aaggaagggcttgaggtcatcgccaccggcaagatcacgacctttgccggaaaatcctcc
taccagatcgtcatcgactcgatggagcccgccggcatcggcgcctggatggcgctgctg
gaggagcgcaagcgccagctcgcggccgaggggctgttcgagactgaccggaagcggccg
atcccgttcctgccgcgggtgatcggcgtcgtcacctcgccgaccggcgcggtgatccgc
gacatcctccaccggctggaggaccgctttccccgccccgtgctggtctggccggtgcgg
gtgcagggggagggggcggccgaggagatcgccgcggcgatccggggcttcaacgcgctg
tcgcccgatggcccgatcccgcggccggacgtgctgatcgtcgcccgcggcggcggctcg
atcgaggatctctgggccttcaacgaggaggcggtggtgcgcgccgccgccgagtccgag
atcccgctgatctcggcggtcggccacgagaccgatacgacgctgatcgacttcgcctcg
gaccgccgcgccccgacacccacgggcgcggccgagatggcggtgccggtgcgggccgaa
ctcgccgcccaggtccacgagctcggcgcccggcaggcgggcacgatgctgcggcggatc
gagcgcgagcgggcggatttccgggcgctcgtgcgggcgatccccggcgccgacgccttc
ctcgccgtcaagcgccagcgcctcgacctcgccgacgcgcggctgcggccggcgctcgcc
gccaacgcccgcgattcccgcgagcgcctgaaccgcgtcgccgaccgcctcacccggcgc
tccccggcgatcgcactggccgaggcgcgggctcggctcgccgccatcgaccaccgcccg
cgcaccgccatgagccgcatcgtcgagcgccgccgcgaccggctcgacgcgctcaccagc
ctgctcggagcgctcagctacaaggccgtgctcgcccgcggctacgcgctcgtgcgcgac
gccgacggcctgccggtgcgctcggccgacgccgccgcccgcgctgcgcggttccaactg
caatttgccgacggcgctctctttgcgcgcccggaggaggctccggacgaccccgttgcg
cccccccttgtcgaagccccgcgctcggcgccgcgcccgaagcgcgcgccccgccgggcc
gcgcccgagcccgcaccgaagcctgagaaggcggcggccgaaccggccgcgcggcaagga
tcgctgttctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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