KEGG   Methanobrevibacter sp. AbM4: Abm4_0413
Entry
Abm4_0413         CDS       T02687                                 
Name
(GenBank) DNA-binding protein
  KO
K06932  tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22]
Organism
meb  Methanobrevibacter sp. AbM4
Brite
KEGG Orthology (KO) [BR:meb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:meb03016]
    Abm4_0413
Enzymes [BR:meb01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.4  Other carbon-nitrogen ligases
    6.3.4.22  tRNAIle2-agmatinylcytidine synthase
     Abm4_0413
Transfer RNA biogenesis [BR:meb03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Abm4_0413
SSDB
Motif
Pfam: DUF1743 tRNA_anti-codon OrfB_Zn_ribbon Zn_Tnp_IS1595 tRNA_anti_2 C1_1 RNA_POL_M_15KD Ribosomal_S27 CoV_NSP2_N zf_Rg DZR Zn_ribbon_SprT DNA_RNApol_7kD TF_Zn_Ribbon
Other DBs
NCBI-GeneID: 15797909
NCBI-ProteinID: AGN16320
UniProt: R9SIP7
Position
508408..509625
AA seq 405 aa
MCTTYLCALVIQRLKDKGFTIEGYPRLIRLNPFARFKTRGNGGVSFKFPKEQFKDHDLNE
AKKIILDAVEELAMFDCDNTNPGVVFYDGEITEEMEAFAYKALHSIITIEEAEEFAEHIG
AEIHKFKKGRGIIGSIASMSCKLTDYTYELLAYRLKENRGTKRHIDYDSVVRMDKLTDTF
ENIDGDYLAIEPNTPCPVLYGIRANDPESLKKAQKIVINGEEVERYCIYLTNQHTDMHLE
DARDIASMKQYSSYIVEGFVKDKPHTIEGGHLFFTLGDESGSIECAAYEPTKDFRKIVAR
LRPKDKVKLYGGIGKENTFNIEKFQVLKLNNIAYRNPKCPECGKTLSSAGHNKGFKCKHC
GYILRDSSKILYEISRQLKEGKFYETPVSARRHLAKPLVRMNLSD
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgtgcactacctatctttgtgcacttgtaattcaaagattgaaagataaagggtttact
attgaaggttatcctagactcattaggttaaatcctttcgctagattcaaaacacgtgga
aatggtggagtttcatttaaatttcctaaagaacaatttaaagatcatgatttaaatgag
gctaaaaaaattattttggatgcagttgaagagcttgcaatgtttgattgtgataatact
aatccaggtgtagtgttttatgacggtgaaatcaccgaagaaatggaggcttttgcatat
aaggcattacattcaattattacaattgaagaggctgaagaatttgcagagcatatcggt
gccgaaatccataaatttaaaaaaggtagaggtattataggatctattgcaagtatgtca
tgtaaacttacagactatacctatgaacttttggcatataggttaaaggaaaataggggc
accaaacgtcatattgattatgattccgttgttaggatggataaattaacagacaccttt
gagaatattgacggcgattatttggctattgaacctaatactccatgtcctgtactttat
ggtattagagcaaacgatcccgaaagccttaaaaaagcccaaaaaattgtaattaatggt
gaggaagtagaaagatactgtatttatttaacaaatcaacatactgatatgcatctggag
gatgctagggatattgcctccatgaaacaatacagctcatatattgttgagggtttcgtt
aaagacaaacctcacactattgaaggtggacatctgttctttacacttggggatgaaagt
ggttccattgaatgtgctgcttatgaacctaccaaagattttagaaaaatcgttgctagg
ttaagacctaaggataaagttaagttatatggtggtattggaaaggaaaacacatttaat
attgaaaaattccaagtgcttaaattgaataatattgcctatagaaatccaaaatgtcct
gaatgtggtaaaaccttaagctctgcaggtcataataaaggatttaagtgtaaacattgc
ggatatattttaagagactcctctaaaattctttatgaaattagtcgtcaattaaaagag
ggaaaattctatgaaactcctgtatctgcacgtaggcatttggcaaaaccacttgttcgt
atgaatttaagtgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (24)   

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