KEGG   Methanobrevibacter sp. AbM4: Abm4_1402
Entry
Abm4_1402         CDS       T02687                                 
Name
(GenBank) DNA mismatch repair ATPase MutS family
  KO
K07456  DNA mismatch repair protein MutS2
Organism
meb  Methanobrevibacter sp. AbM4
Pathway
meb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Abm4_1402
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meb03400]
    Abm4_1402
DNA repair and recombination proteins [BR:meb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Abm4_1402
SSDB
Motif
Pfam: MutS_V AAA_14 HHH_5 AAA_28 AAA_21 AAA_29 5_3_exonuc AAA_23
Other DBs
NCBI-GeneID: 15798892
NCBI-ProteinID: AGN17279
UniProt: R9SM90
Position
1642988..1644913
AA seq 641 aa
MIDDRVKLEDIKGVGEKLSGKIIRELGGEENLYEIVDNLELEKLTSIEGISQKKAIEIMN
QLLGNPKQEFLKSDRAVEIYDDIIQKILAYSNTEYSKNRILLLSPTKDKERIKSNIQFVM
DAKEKVSNLPIIKLKGLMKNLHKPIKPKAQFDASKLILVESDEDNAYLTDLGLNQYFSII
TARNSPTLIEEIRNYELILYVYSEGLLDFSDSPNVVMISKESSKEEIVPDIMLNYFNLNK
ELFKNVGIIRKILNLDTVLEDIEPILDEVNIVEKDNVDIDGAVHDAKEYGNKKLKEEIKN
IDLEGEEVLDLLNHEMPSKLENILKDTLTELDEMIYKETSIRFDPFIKKYPLEIDEDEIR
RVKCDIESKRENNIYDMKLNAANHLKAIKDKAEKEVEEVIKFDYEFSLGSFAYEYDLHAP
VISDGFKFKGALHLNLALKNPEKIQRIDYELSPRENIALLTGANSGGKTTLLETISQISI
MTQMGLPVCAESAEVIILDEIYHFSKKRSLDAGAFETFLNIFMPIVTTNSQKLVLLDELE
GITELEAAVKIISSFIEMIEKTDSFGIIVTHMAKELMLYTDVRVDGIEAKGLDENYDLIV
DRTPKMNYLARSTPELILKRIYENSEGTLKEVYGEVLKKFD
NT seq 1926 nt   +upstreamnt  +downstreamnt
atgatagatgatagggtcaaattagaggatattaaaggagtaggagaaaagctctcaggt
aaaattatacgggaacttgggggagaagagaacctatatgaaattgtggataacctggaa
cttgaaaaacttacgtcaatcgaaggaatatcccagaaaaaagcaattgaaataatgaat
caacttcttggaaaccctaaacaagaatttttaaaaagtgatagggctgtagaaatctat
gatgacatcatacagaaaatattagcttattctaatacggagtattccaaaaatagaata
ttgctactttcacctactaaggataaagaaagaataaagtccaatatccaatttgtaatg
gatgcaaaagaaaaggtgtcaaatttacccatcataaaacttaaaggtttaatgaaaaat
ttacataaaccaattaaaccaaaagcacagttcgatgcaagtaaactcatattagtagaa
agtgatgaggacaatgcttatttaacagatttaggacttaaccaatatttctccattatt
actgctaggaactcacctacccttatagaggaaattagaaactacgaattaatattgtat
gtttattccgagggacttcttgattttagcgattcacctaacgttgtaatgataagtaaa
gaatcttccaaagaggaaatcgttccagacatcatgttaaattattttaatttaaataag
gaattgtttaaaaatgttggaattattagaaaaatacttaatttagacactgtccttgaa
gatatagaacctattcttgacgaggtaaatatcgttgaaaaggataatgttgatattgat
ggggcagtacatgatgctaaagaatatggtaataagaaacttaaggaggaaataaagaat
attgaccttgaaggggaggaagtgttagatctattaaatcatgaaatgccatcaaaactt
gaaaatatcctgaaagacacattaaccgaattagatgagatgatttataaagaaacatca
ataagatttgatccttttattaaaaaatatcctcttgaaattgatgaggatgaaatcaga
cgtgtaaaatgtgatattgaatcaaaacgcgaaaataatatctatgacatgaaacttaac
gctgcaaaccatcttaaagcaataaaagacaaggcagaaaaagaggttgaagaggtaatt
aagttcgactatgaattttcacttggaagtttcgcatatgaatatgacctacacgcacca
gtaatatctgacggatttaaatttaaaggggcattacacttaaatcttgcactaaagaat
cctgaaaagattcagagaattgattatgaactaagtcccagagagaacatagccctttta
acaggcgcaaatagtggtggtaaaaccacattacttgaaaccataagtcaaatttcaata
atgacacagatgggacttccggtatgtgcggagtctgcggaagtaatcattcttgatgag
atatatcacttctccaaaaaacgatcacttgatgcaggtgcttttgaaacatttttgaat
atatttatgccaattgttactacaaacagccagaaattagtacttcttgatgaacttgaa
ggaattacagaattagaggcagctgtcaaaattatatcaagctttattgaaatgattgag
aaaacagattccttcggtattattgtaacacacatggcaaaggaactaatgctatatacc
gatgttagagtggatggtattgaagctaagggattagatgaaaactatgatttgattgta
gatagaaccccgaaaatgaattatttagctagaagtacaccggaattgattcttaaaaga
atctatgaaaactccgaaggtactctaaaagaagtttatggagaggttcttaaaaaattt
gattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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