KEGG   Methanosarcina sp. WH1: MSWH1_1680
Entry
MSWH1_1680        CDS       T03851                                 
Name
(GenBank) CRISPR-associated protein, Csm5 family
  KO
K19140  CRISPR-associated protein Csm5
Organism
mef  Methanosarcina sp. WH1
Brite
KEGG Orthology (KO) [BR:mef00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mef02048]
    MSWH1_1680
Prokaryotic defense system [BR:mef02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    MSWH1_1680
SSDB
Motif
Pfam: RAMPs Ku
Other DBs
NCBI-ProteinID: AKB21951
UniProt: A0A0E3L4Q9
Position
complement(2063070..2064242)
AA seq 390 aa
MKCSMKLLSPLHVGNGNELKMVDFYLDEKEGKIKFINFEKFIEHCINENIDLTKEMPKNK
YKTGRDFSITKFMDANQINPNAFTSYSVYAKIEKRDRESEFAIKEFVKCGEPYLPGSSIK
GAIRTALMWNCLNERPDGAEIVQNGLKPWLKKHRITGRDLKFLDDNISKIVFGKDTHSDI
LRILRPSDTGPAGKKRLEVSEIKIVGNSQEIPVYVENLEAGSELFFDIVFDEYLIKQNKG
EPNFKNHPCIKYMNVQAICKACNEFSRKVIEKHLEYMWENYRCDSTADEFDMLWNEVGNC
KDNEAVLHIGWGGGWYSTTIGLIIETLPGFSTPLIGDPKKWRLENNTIRHSFSLGKKPGT
YQFSSNFPKTRRVTLEGKPLGWVKLEFESL
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgaaatgcagcatgaaactcctgtcccccttgcacgtagggaacggaaacgaactgaaa
atggttgatttctacctggatgaaaaggaagggaaaatcaagttcataaattttgaaaaa
ttcattgaacactgcataaatgaaaatatagacctcacaaaggagatgccaaaaaataag
tataaaacgggcagggatttctcgattaccaaatttatggatgcaaatcagatcaacccc
aatgcttttacctcctattccgtttacgcaaaaattgaaaagcgagaccgcgaatcagag
tttgctatcaaggagttcgtaaaatgcggggaaccatatttacccggttcgtccataaaa
ggagcaatcaggaccgcattaatgtggaactgtttgaatgaaagacctgacggagctgag
attgtccagaatggtctgaagccctggttgaaaaagcatagaatcaccggtagagactta
aaattccttgatgataacatttcaaaaatcgttttcggaaaggatacacattcggatata
cttcgcatcctgagaccctccgatacaggacctgcagggaaaaagcgtttagaggtatcc
gaaatcaaaattgttgggaactcacaggaaattcccgtgtatgtcgagaacctggaagcc
ggttcagagctcttttttgatattgtttttgatgaatatctgattaagcagaataaggga
gaaccgaacttcaaaaaccacccctgtatcaaatacatgaatgtccaggctatttgcaag
gcttgcaatgaattttcgaggaaggtcatcgaaaaacatctggaatacatgtgggaaaat
tacaggtgtgacagcacagctgatgaatttgacatgttatggaacgaagtagggaattgt
aaggataacgaggcggttctgcatatcggctggggaggaggctggtacagcacaacgatt
ggtttaataattgaaacactgccaggattttccacgcccctgataggagatccgaaaaaa
tggagacttgaaaataatacaatcaggcacagctttagtctcggcaagaagcctgggaca
taccaattctcctcaaatttcccgaaaacacgtagggtaactcttgaaggcaaacctctc
ggctgggtcaagttagaattcgaaagtctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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