KEGG   Methylotenera versatilis: M301_1959
Entry
M301_1959         CDS       T01247                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
meh  Methylotenera versatilis
Pathway
meh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:meh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M301_1959
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:meh03019]
    M301_1959
Enzymes [BR:meh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     M301_1959
Messenger RNA biogenesis [BR:meh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     M301_1959
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 UvrD-helicase Shikimate_DH P-loop_SecA AAA_22
Other DBs
NCBI-ProteinID: ADI30331
UniProt: D7DJX0
Position
2181085..2182683
AA seq 532 aa
MTTETILNFNELGLSEPILRAINDAGYTTPTPIQSKAIPQVLSGGDLLAGAQTGTGKTAG
FTLPILHLLSQKPLSEVVKGRPRCLMLTPTRELAAQIEESVKVYGKFLPLTSTVIFGGVN
ANPQIARLKKPLDILVATPGRLLDHANQKNVDLSGIEILVLDEADRMLDMGFIRDIKKIL
AMLPKQRQNLLFSATFSDEIKALADGLLHNPGFVEVARRNTASELVEQTVHMVAQGHKRE
LMSHLIQQNDWQQVLIFTRTKHGANRLAEKLVKDGIQSAAIHGNKSQSARTKALAQFKDG
TMRVLVATDIAARGLDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGSSGAAVSLVDREEL
KLLKDIEKLIKREIPKVQVEGFTPSDKPEPEAPRSTQPHGRPPRGHGQGQQRKAHVPAST
EGNGANPNAGRNQNRGNGQRNGQAPRNDARANTEGRPAQGNKARPAQGENTRNMSEAARH
QAMPQPALFVPPSPNRHQPNRQNAARPNEGRGNAGRTNANPNSAHRSGGRGR
NT seq 1599 nt   +upstreamnt  +downstreamnt
ttgacaactgaaacaatccttaactttaacgagttaggtttatctgaacccattttgcgt
gcgattaacgacgcaggatataccaccccaaccccaattcaatctaaagcgataccgcaa
gtattaagcggtggcgatttacttgctggcgcgcaaaccggaacgggtaaaaccgcaggc
tttaccttgccgattttgcatctgcttagccaaaaacctttgagcgaagttgttaaagga
cgcccgcgctgcttaatgctaacgccaacgcgcgagcttgctgcgcagattgaagaatct
gtaaaagtgtatggcaagtttttacctttaacctctactgtaatttttggcggagtaaac
gccaacccacaaattgcgcgcttgaaaaaaccactggatattttagtggcaacgccaggc
cgcttgcttgaccatgctaaccaaaaaaacgttgatttgtcaggcattgagattttagtg
ctagatgaagctgatcgcatgttggacatgggttttatccgtgacatcaaaaagatatta
gcaatgctacctaagcaacgccagaacctattgttctctgcgactttctcagacgaaatc
aaagccttagccgatggtttattgcacaacccaggctttgtggaagtggctcgtcgcaac
actgcctctgaactggtagagcaaacggtacacatggttgcgcaaggccataaacgtgag
ttaatgagccacctcattcaacaaaacgattggcagcaagtattaatattcactcgcacc
aaacacggtgcgaatcgtttagctgaaaaactggtaaaagacggtattcaatccgcggcc
attcacggcaacaagagccaaagtgcacgtacaaaagcattagcgcaatttaaagacggc
acgatgcgtgtgttagttgccactgacatcgcggcacgtggtttggacattgaccaatta
ccgcaagttgtgaattttgaattaccgaatgtaccagaagattatgtacatcgtattggc
cgtaccggtcgtgcaggcagtagcggtgccgcggtttcattggttgatcgtgaagaactg
aagctgcttaaagacattgaaaagctaattaaacgcgagattccaaaagtgcaagttgaa
ggctttacaccatctgataagccagaaccagaagcaccacgttcaacccaacctcatggc
agaccaccacgtgggcacggtcaaggtcaacaacgtaaggcgcatgtgccagctagcact
gaaggcaatggcgcaaaccctaatgctggtcgtaatcaaaaccgaggcaatggtcagcgt
aacggccaagcgccgagaaacgatgcaagagcgaatacagagggtcgcccagcacaaggc
aacaaagctagacctgcgcaaggtgaaaacacaaggaatatgtcagaagctgcgcgccac
caagcaatgccgcaaccagctttatttgttccaccaagcccgaatcgccatcaacctaat
cgacaaaatgctgcacgccctaatgaaggtcgcggtaatgcgggcagaacgaacgcaaac
ccaaatagtgcacacagaagcggtggtagaggtcgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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