KEGG   Methylovorus glucosetrophus: Msip34_1263
Entry
Msip34_1263       CDS       T00943                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
mei  Methylovorus glucosetrophus
Pathway
mei03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Msip34_1263
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mei03400]
    Msip34_1263
DNA repair and recombination proteins [BR:mei03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Msip34_1263
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Msip34_1263
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 Kinesin DALR_1
Other DBs
NCBI-ProteinID: ACT50509
UniProt: C6XD84
Position
1360772..1362808
AA seq 678 aa
MIVTFPNSRYQLHQPFPPAGDQPAAIEKIITGIEQGMQYQTLLGVTGSGKTYTMANVIAR
TGRPAMVMAPNKTLAAQLYSEFREFFPNNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NDHIEQMRLSATKSLLEREDSIIVATVSAIYGIGDPGEYHGMVLHIHQGMKISQRDIVNK
LITMQYDRNDFDFSRGAFRVRGDVVDVFPSENSETAVRISLFDDEIETIQLFDPLTGQVF
NKIHNFRIFPSSHYVTAREATVRAMETIKQELRDRVDFFIKNNKLVEAQRIEQRTRFDLE
MLNEIGFCKGIENYSRHLTGRSPGDAPPTLIDYLPANALMIIDESHVTIPQIGGMYKGDR
ARKENLVDYGFRLPSALDNRPLRFEEFERIMRQTVFVSATPADYEATHQEQVVEQVARPT
GLIDPEITVKPADTQVDDLLSEIKLRVAVGERVLATTLTKRMAEDLTDYLSEHGVKVRYL
HSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAVLDADKEGFLRSERSLI
QTAGRAARNLNGKVIFYANNITRSMKLAMDETQRRRTKQMAFNEAHGIVPKGVTKRIKDI
IDGVYDKDDAKRERQAAQDQASYEALSEKQIIKEMKRLEKSMHDSAQNLEFEKAAEFRDQ
LKKLKAKFYGTDVPDILP
NT seq 2037 nt   +upstreamnt  +downstreamnt
gtgattgttactttccccaatagtcgataccagcttcatcagcctttccctcccgccggc
gaccagcctgctgccatagaaaaaatcatcaccggtatagagcagggcatgcaataccag
accctgcttggggtaaccggctccggtaaaacctataccatggccaatgtgattgcccgt
accggccggccagccatggtcatggcgcccaacaagacgctggctgcgcagttgtattcg
gagtttcgcgagttctttccgaataatgcggtggagtatttcgtgtcctattacgattac
tatcagcctgaggcctatgtgccctcgcgcgatctgtttatcgaaaaagactccagcatc
aatgatcacattgagcagatgcggctctcagcgaccaagtcgctgctggagcgcgaagac
agcattatcgtggccaccgtctcggccatttacggcatcggggatccaggtgagtaccat
ggcatggtgctgcatattcatcagggcatgaagatcagtcagcgcgacattgtgaacaag
ctgattacgatgcagtacgaccgtaatgactttgacttctcacgcggtgcctttcgggtg
cgtggcgatgtggtggatgtgttcccatcagaaaacagtgagacggccgtccgcatcagc
ctgtttgacgatgaaatcgaaaccatccagctgtttgatcccctgaccggacaagtattc
aacaagattcacaatttccgcatcttcccttccagtcattatgtgacagcgcgggaagcc
accgtgcgggcgatggaaaccatcaagcaggaactgcgtgatcgcgtggacttctttatc
aagaacaacaagctggttgaggcgcaacgcatagagcagcgcacgcggtttgacctggaa
atgctcaatgaaatcggtttctgcaaggggattgaaaactacagccgccatcttaccggc
cgctccccgggcgatgcgccgccgacactgattgattatctgccagccaatgccttgatg
atcattgatgaaagccacgtgactattccgcagatcggtggcatgtacaagggcgaccgc
gcacgcaaggaaaacctggtggattatgggttccgcttgccttcggcgctggataaccgg
ccgctgcgatttgaagagtttgagcgcatcatgcgacaaaccgtgtttgtcagcgccacg
cctgccgactatgaagccacgcaccaggagcaggtagtggagcaggtggcgcggccgact
ggcctgatcgacccggaaatcaccgtaaaaccggcagatacccaggtggacgatctgctc
tcggaaatcaagctgcgggtggccgtgggcgagcgcgtgttggcgacgaccctgaccaag
cgcatggccgaggatttgaccgactatctgtctgagcacggcgtgaaggtgcgctatctg
cactcggacattgataccgtggaacgggtggaaatcattcgcgacttgcgccttggcgag
tttgatgtactggtcggcatcaacctgctgcgtgaggggctggatattcccgaagtttct
ctggttgctgtgctggatgctgacaaggaaggtttcctgcggtcagaacgttccctgatt
caaacggcaggccgcgctgcgcgtaaccttaatggcaaggtgatcttttacgccaataac
attacccggtcgatgaagctggccatggatgaaacgcaacggcgtcgtaccaagcagatg
gcattcaatgaggcacacggtatcgtgcccaagggggtgaccaagcgcatcaaggatatt
attgacggcgtgtatgacaaggatgacgctaaacgcgaacggcaggctgcgcaggatcag
gccagctatgaagccctgagcgaaaaacagatcatcaaggaaatgaaacgcctcgaaaaa
tccatgcatgacagcgcgcaaaacctggagtttgagaaagcagcagaattccgggatcag
ctgaaaaaactcaaggccaaattctacggaacagatgttcccgatattctgccttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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