KEGG   Methanoculleus marisnigri: Memar_1962
Entry
Memar_1962        CDS       T00477                                 
Name
(GenBank) THUMP domain protein
  KO
K07583  tRNA pseudouridine synthase 10 [EC:5.4.99.25]
Organism
mem  Methanoculleus marisnigri
Brite
KEGG Orthology (KO) [BR:mem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mem03016]
    Memar_1962
Enzymes [BR:mem01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Memar_1962
Transfer RNA biogenesis [BR:mem03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Memar_1962
SSDB
Motif
Pfam: Pus10_C THUMP
Other DBs
NCBI-ProteinID: ABN57888
UniProt: A3CWY8
Position
complement(1956375..1957613)
AA seq 412 aa
MDIIQEVEAILGYGDTCNHCLGRFFGKRSFGLTNEERGRALRVAHELATNEPHHEPDPES
CWICGGELSRTEEWAKRVVEAVDGIEFETFLIGTKVPPLVAESEEMVWSDLSLRDPEPLK
AEMNREVGKAVSAISGKTADLKKPDVVAILDLGEGTVEVQVNPVFFVGRYLKYERGIPQT
HWDCRACRGAGCEKCNFTGKQYADSVEELIGRPAIEAFNAANAVLHGAGREDIDARMLGS
GRPFVLEIEEPRKRSVDLAALEAEINREAAGRVEVHLEGWADRKMVQSLKSDKAHKKYRI
LVEIDGSVTPDEFRAALDQLKGVTIRQRTPNRVAHRRADKVRERQVLDIECTGSVDGRYW
VEVVGEAGLYIKELVSGDNGRTQPSLAQILGRTASVVSLDVVLVKTANEYGE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggatatcatacaagaggtagaagcaattcttggatacggcgatacctgcaaccactgc
ctcgggcggttcttcggcaagcggtcgtttgggctgacgaacgaggagcggggcagggct
ctgcgggtcgcgcacgaacttgcgacaaacgagccgcaccacgaacctgacccggaatcc
tgctggatatgcggcggcgaactctcccgcaccgaagaatgggcgaagagggtggtcgaa
gcagtggacggcatcgagttcgagaccttccttatcgggacgaaggtgccgccgctcgtc
gcggagagcgaggagatggtctggagcgatctctcgctccgcgaccccgaaccgctgaag
gccgagatgaaccgggaggtcggaaaagccgtctcggcaatctccgggaagacggccgac
ctcaagaagcccgatgtcgtcgcgatcctcgatctcggtgagggcaccgtcgaggtgcag
gtcaaccccgtcttcttcgtcggccgctacctgaagtacgagcgcggcatcccccagact
cactgggactgccgggcgtgccggggcgcgggatgcgagaagtgcaacttcaccggcaag
cagtacgccgactccgtcgaggaactgatcggccggccggcaatcgaggcttttaacgca
gcaaacgccgtcctgcacggtgccggtcgggaggatatcgacgcccggatgctcgggtcg
ggccgccccttcgtgctggagatcgaggagccgcggaagcgttcggtggatctcgcggcg
cttgaagcggagatcaaccgggaggccgccggccgggtggaggttcaccttgaaggatgg
gcggatcggaagatggtgcaaagccttaagtccgacaaagcgcataaaaaatacaggatc
ctggtcgagatcgacggttctgtaaccccagatgagttcagggcggccctcgatcagtta
aaaggtgtaacgatacggcagcgcaccccgaatagggtggcacaccgacgggcagataaa
gttcgggaacggcaggtcctcgatatcgaatgcacgggtagcgtcgacggcagatactgg
gtcgaagtcgtcggcgaagcgggcctgtacatcaaagaactggtatcgggtgacaacggc
agaacccagcccagccttgcccagatcctggggcgcaccgcaagtgttgtcagcctcgat
gtggtgctggtcaaaacagctaacgagtatggtgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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