KEGG T04283: Y590

Methylobacterium sp. AMS5: Y590_22635

Entry

Y590_22635        CDS       T04283

Name

(GenBank) double-strand break repair helicase AddA

K16898

ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]

Organism

meta Methylobacterium sp. AMS5

Brite

KEGG Orthology (KO) [BR:meta00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meta03400]
    Y590_22635
Enzymes [BR:meta01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Y590_22635
DNA repair and recombination proteins [BR:meta03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     Y590_22635

SSDB

Motif

Pfam:

UvrD-helicase PDDEXK_1 UvrD_C AAA_19 UvrD_C_2 AAA_30

Other DBs

NCBI-ProteinID:

AMB47758

Position

4906056..4909571

AA seq 1171 aa
MNAPLTGFTVDDLTKAAQRRAADPRLSAWVSANAGAGKTKVLTDRVLRLLLDGAPPGRIL
CLTFTKAAAANMSIRVFQRLGRWVTLDDAALTAELTELTGVRPARDTLRLARRLFARAVE
TPGGLKIETLHALCERLLHMFPFEANVPARFVVLDDNQSREAFEIETDNVLADAILGGNQ
ALSDALAVVGAEASGDTLRDAIRSAMRTRALFSDHRALEPALARLPRALGLPDGASVESI
EAEILRGSSLGDWREIAGRLRTGKATDEKLADGLVEAHAALEAGKALAPYRSVFFTDKDE
PRAAKSFGTKAVPEDVKQALLDEQARLVPLFDSLRAARALARTQGLFWLAAEIHRRVEAQ
KTRLGALDFDDLIHKTLDLLSRVGASWVLYKLDRGVDHVLVDEAQDTNPQQWEILRTLTA
EFAAGEGARGLTRTRFAVGDPKQSIYSFQGADPREFELTRRAWGRAAEGAGHDFADVSLR
LSFRTASHVLAAVDAVFGVPEHFAGLSFDAGAPGTVHASARAGVPGAVELWGIEEPAEAD
EPDAWAAPVDAPEPNAPAIVVARRIARAVKAWTTKGDACGRIWRPGDVLILVRKRSAAFE
EVIRAMKGLGVPVAGQDRLEVAGHIAVLDLVAVGRAGLLPADDLTLATALKTPLVGLTDD
DLTRICARRPFAETLEDALTRHAETGDGAAIRGLAALRLWIRLAAENGPFGFYAALLGPH
GGRSRLVARLGGEAGDAIDVFLAQAADAENGGDAPCLDAFLADYIVRPGRGRSGLSVKRD
LESGRDEVRVMTVHGAKGLEAPVVVVIDGCEPLGRNDPPLLGLDPPADGPLPPVWTGGRM
QDCAATLAARSALQARAREEHNRLLYVAMTRAADHLVIAPYRGATRETPASWCEMVRLGL
ERGLGAGEAVETEHGPITIWRDGSGASLAHAAEDTALPEPETVPDWLFSAAAPEAEAAPP
LSPSGALGAADGQRQPRRRLGDAEARRRGALVHALLEHLPRIEPARRGEAADRFARARAP
ALEEGKRKDLVRAVLRLIEAPDLAPLFSGQARAEVALSGRIVVDGIERDVTGRIDRLVVE
DGRVILCDFKTGRPPADDAPLPEREAAQVSLYARLAAAIWPQHAIVALLVWTSGPVVRRV
EEALPDNERCPMIERRESIVPKGGGRLSEKR

NT seq 3516 nt +upstreamnt +downstreamnt
gtgaacgccccgctgaccggcttcaccgtcgacgacctgaccaaggcggcccagcgccgg
gccgcggacccgcgcctctcggcctgggtctcggccaatgcgggcgcaggcaagaccaag
gtgctcaccgaccgggtgctgcgcctgctcctcgacggcgcgccgcccggccgcatcctc
tgcctcaccttcaccaaggcggcggccgccaacatgtcgatccgcgtgttccagcgcctc
gggcgctgggtgacgctggacgacgcggcgctgaccgcggaactcaccgaactcaccggc
gtgcggcctgcccgcgacaccctgcggctggcccgccgcctgttcgcccgcgccgtcgag
acgccgggcggcctcaagatcgagacgctgcacgccctgtgcgagcggctgctgcacatg
ttcccgttcgaggccaacgtgccggcccgcttcgtcgtgctcgacgacaaccagtcgcgc
gaagcgttcgagatcgagaccgacaacgtgctcgccgacgcgatcctcggcggcaaccag
gcgctctccgatgcgctcgccgtggtcggcgcggaagcctccggcgacaccctgcgcgac
gcgatccgctcggccatgcggacgcgggccctgttctccgaccaccgtgccctggagccg
gcactcgcccgcctgccgcgcgccctggggctgccggacggcgccagcgtcgagtccatc
gaggcggagattctgaggggcagcagcctcggcgactggcgcgagatcgcgggccggctg
cgcaccggcaaggcgaccgacgagaagctcgccgacgggctcgtggaggcgcacgccgcc
ctcgaagccggcaaggcgctggcgccctaccgctcggtcttcttcaccgacaaggacgag
ccgcgtgcggccaaatccttcggcaccaaggcggtgccggaggacgtgaagcaggcgctg
ctcgacgagcaggcgcgcctcgtcccgctgttcgacagcctacgcgccgcccgcgcgctc
gcccggacgcagggcctgttttggctcgccgccgagatccaccgtcgggtcgaggcgcag
aagacgcgtctcggcgccctcgatttcgacgacctgatccacaagaccctcgacctgctc
tcgcgggtcggcgcctcctgggtcctgtacaagctcgaccgcggcgtcgatcacgtcctc
gtggacgaggcgcaggacaccaacccgcagcaatgggagatcctgcgcacgctcaccgcc
gagttcgcggcgggcgaaggcgcgcgcggtctcacccgcacccgcttcgccgtgggcgat
ccgaagcagtcgatctacagcttccagggcgccgacccgcgggagttcgagctgacccgc
cgcgcctggggccgggcggcggaaggggccgggcacgatttcgccgatgtcagcctcagg
ctctcgttccgcaccgcgagccatgtgctcgcggcggtcgatgcggtgttcggcgtgccg
gagcacttcgccggcctctcgttcgatgcgggcgcgccgggcacggtccacgcctccgcc
cgggccggcgtgcccggcgcggtcgaactctgggggatcgaggaaccggcggaggccgac
gagcccgatgcctgggccgcccccgtcgatgcgcccgagcccaacgccccggccatcgtc
gtcgcccgccgcatcgcccgcgcggtgaaggcctggacgacgaagggcgatgcctgcggc
cggatctggcggcccggcgacgtgctgatcctcgtgcgcaagcgctcggccgccttcgag
gaggtgatccgggcgatgaaggggctcggcgtgccggtggcgggccaggaccggctcgag
gtcgcgggccacatcgccgtgctcgatctcgtcgcggtcggccgcgccgggctgctgccc
gccgacgacctcaccctcgccaccgccctcaagacgccgctcgttgggctgaccgacgac
gacctcacccgcatctgcgcccgccgccccttcgccgagacgctggaagacgcgctgacc
cgccacgcggagaccggcgacggggcggcgatccgcggcctcgcggccctgcggctgtgg
atccggctcgcggcggagaacggcccgttcggcttctacgccgctctgctcgggccccat
ggcgggcgcagccggctggtggcgcggctcggcggcgaggcgggcgacgccatcgacgtg
ttcctggctcaggccgccgacgccgagaacgggggcgacgccccctgcctcgacgccttc
ctcgccgattacatcgttcggcccggccgcggccgaagcggcctctcggtcaagcgcgat
ctggaatcgggccgcgatgaggtgcgggtgatgacggtccacggcgccaagggcctggag
gccccggtcgtcgtcgtcatcgacggctgcgagccgctcggccgcaacgacccgccgctc
ctcggcctcgacccccccgccgacggcccgctgccgcccgtctggaccggcgggcgcatg
caggattgcgcggcgacgctggccgcccgctccgccctccaggcgcgggcgcgcgaggag
cacaaccgcctgctctacgtcgccatgacccgggccgccgaccacctcgtcatcgcgccc
tatcgcggggcgacgcgggagacgccggcctcgtggtgcgagatggtccgcctcggcctg
gagcgggggctgggggccggcgaggcggtcgagaccgagcacgggccgatcacgatctgg
cgcgacggctccggcgcttccctcgcccacgctgcggaggacacggccttgccggaaccc
gagacggtgccggactggctcttctcggcggccgcaccggaagccgaggccgcgccgccg
ctgagtccgtcgggcgcgcttggcgcggcggacggtcagcgccagccccggcgccgtctc
ggtgacgccgaggcgcgccgccgcggcgccctggtccacgcgctcctcgaacacctcccg
aggatcgagccggcccggcgcggggaagccgccgaccgtttcgcccgcgcccgcgcaccg
gccctggaggagggaaagcgcaaggatctcgtccgcgcggtcctgcggctgatcgaggcg
cccgacctcgcgccgctgttctcaggccaagcgcgcgccgaggtggcgctctcgggccgg
atcgtcgtggatgggatcgagcgcgacgtcaccggccgcatcgaccggctcgtcgtggag
gacggccgggtgatcctctgcgacttcaagaccggccgcccgcccgcggacgacgcaccc
ctgccggagcgcgaggcggctcaggtcagcctctacgcgcggctcgccgccgcgatctgg
ccccagcacgcgatcgtggccctgctggtctggacctcggggccggtggtgcggcgggtg
gaggaagccctgccggacaatgagcgttgcccgatgatcgagcgccgggagagcatcgtc
ccgaaaggtggtggccggctttcggaaaaaagatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

Download RDF

DBGET integrated database retrieval system