KEGG   Methanosarcina sp. MTP4: MSMTP_1021
Entry
MSMTP_1021        CDS       T03850                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
metm  Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:metm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:metm03032]
    MSMTP_1021
   03400 DNA repair and recombination proteins [BR:metm03400]
    MSMTP_1021
Enzymes [BR:metm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MSMTP_1021
DNA replication proteins [BR:metm03032]
 Prokaryotic type
  DNA Topoisomerases
   MSMTP_1021
DNA repair and recombination proteins [BR:metm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MSMTP_1021
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Rho_RNA_bind TraG-D_C Noelin-1
Other DBs
NCBI-ProteinID: AKB24490
UniProt: A0A0E3NV01
Position
complement(1294417..1297164)
AA seq 915 aa
MAEYDEENRTEAEKKNSFQATLIPDEPKEEPEGEPEEEPEGETVGEPVGEPEGETVGEPV
GEPVDPEEDPEEDPEGETVGYPEGDPEENSEGRQGIVPVLIDDEMKKSYINYAMSVIVGR
ALPDARDGLKPVHRRILYSMKESGITHEKPYKKSARVVGDVLGKYHPHGDSAVYDSIVRM
VQDFSLRYPMIDGQGNFGSIDGDSAAAMRYTEVRMGKITEEMLADIDKETVPFRPNYDGS
LEEPEVLPAKLPSLLINGSTGIAVGMATNMAPHNLTEVIDGTLMLIDEPETTIQELMSVI
KGPDFPTAANILGTAGIRSAYMTGRGPVKIRAVAEIQEMKKDREQIIVTELPYQVNKARM
IENIAHLVRDKVISGISDLRDESDRDGIRVVIELSRGTNPHVLLNQLYKHTQMETSFGII
NLALVDGKPKELNLKELLEIYLAHRMEIIQKRTLYDLRKSEDRAHILRGLRIALDNIDAV
VALIRASENAEEAKSGLVENFELDEIQAKAILDMRLQRLTGLETQKILDELESLIKLIAE
LREILASDELKYGIIRDELTQIREKYGDKRRTKIMQFAEEVTDEDLIPEEDVVVTITDSG
YIKRLPLETYSSQRRGGRGIIGMETKDEDFVENLFISSTHNYILFFTNRGRVHWRKVYEI
PESSRQSKGKAIVNLLELREGEMVNAMIPVKEFSEDRFLLMVTQAGTIKKTPLSDFKNPR
KGGIIAVGLAEGDELVKVLLTDGKREIVMVSKKGKAIRFSEADVRSMGRSARGVRGMTLD
GSDDKVVSMDLVDESTKLLTLTENGYGKRTEYSQYPAHRRGGKGVITINTTLRNGYVANV
KSVADDDELMITSAEGIIIRIPATDISVQGRNTQGVRIMNLKSGDKVVGMARIKTENGDD
EKQMKLPVAGEIEEE
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggcagaatacgacgaagaaaacaggaccgaagccgaaaagaaaaactctttccaggca
accctgatcccggacgagccgaaagaggaacctgaaggagagccggaagaagaacctgaa
ggagaaacggtaggagaaccagtgggagaacctgaaggagaaacggtgggagaaccagtg
ggagaaccagtggatcctgaagaagatcctgaagaagatcctgaaggagaaacggtggga
tatcctgaaggagatcctgaagaaaattccgaaggtaggcaggggatcgtcccggtcctt
atcgacgacgagatgaaaaagtcctacatcaactacgccatgagcgtgatcgtgggaagg
gcgcttcccgatgcacgggacgggctaaaacctgtccaccgcaggatcctctattccatg
aaagagtccgggatcactcatgaaaagccttacaagaagtccgcccgtgtggtcggagac
gtgcttggtaagtaccacccccacggggactcggccgtctacgacagtatcgtgcgtatg
gtccaggacttctctttacgctatcccatgatcgatgggcagggcaacttcgggtccatt
gatggggattcggcagccgccatgcggtacaccgaagtccggatgggcaaaattacggaa
gagatgctggcagacatcgacaaggagaccgtgcctttcaggcccaactacgacgggtcc
ctggaagagcctgaagtcctgcccgcaaagcttccaagcctcctgattaacgggtccacg
ggaatagccgtcgggatggcaacgaacatggcgccccataacctcacggaggtcatcgac
gggaccctcatgcttatcgacgagcccgaaacgacaatccaggaactgatgagcgtcatc
aaaggtcccgacttcccgacagccgcaaacatcctggggactgcagggatcaggtccgca
tacatgacagggagaggccctgttaagatccgggcggttgccgagatccaggaaatgaag
aaggatagggaacagattatcgtaaccgagcttccctaccaggtgaacaaggcccggatg
atcgagaacatcgcccaccttgtccgggataaggtcatcagcgggatttccgatcttagg
gacgagtcggacagggacgggatcagggtcgtgatcgagctttccaggggcacaaacccc
cacgttctcctgaaccagctctacaagcacacccagatggagacctccttcgggatcatc
aacctggccctggtggacgggaaaccgaaggaacttaacctgaaagagctcctggaaatc
tacctggcccacaggatggaaatcatccagaaaaggaccctgtacgacctccggaaaagc
gaagaccgggctcacatcctgagaggcctccggatcgccctagataacattgacgcagtt
gtggcccttatccgcgcctcggaaaatgccgaggaggcaaaaagcgggctggtcgaaaac
tttgaacttgacgaaatccaggcaaaagccatcctggacatgcgcttgcagcgcctgacg
ggccttgagacccagaaaatcctcgacgagctggaaagcctcatcaagctgattgccgaa
ctcagggagatcctggcaagcgacgagctcaagtacgggatcatccgggacgagcttacc
cagataagggaaaagtacggggacaagcgcagaacaaagatcatgcagtttgccgaagag
gtcacggacgaagacctgatccctgaagaagacgtggttgtcacgatcactgacagcggc
tatattaagaggcttcccctggaaacctactccagccagcgccgtggaggtagaggcata
atcggcatggagaccaaggacgaggacttcgttgaaaacctcttcatctcttcaacccac
aactacatcctcttcttcacgaacaggggcagggtccactggcgaaaggtctacgagatc
cccgaaagcagccgccagtccaaaggcaaagccatagtaaacctcctggaactccgggaa
ggtgaaatggtaaacgccatgatcccggtaaaggagttttcggaagaccgcttcctcctg
atggtcacacaggcaggcacgatcaagaagaccccgctctcggacttcaaaaacccccgc
aaaggaggcatcattgcagtcggccttgcggaaggtgacgagctcgtaaaagtcctcctg
accgacggcaagcgggaaatcgtaatggtctccaagaaaggaaaagccatccgcttctcc
gaagccgacgtccgttccatgggccgctccgcccgcggagtccgcggcatgacccttgac
ggttccgatgacaaggtggtcagcatggacctggtcgatgagagcacaaaactcctcact
ctcaccgaaaacggctacggcaaacgaaccgagtactcccagtaccccgcccaccgccgc
ggcggaaaaggtgtaatcaccatcaacacgaccctcaggaatggctacgtagctaacgtc
aaatccgtcgccgacgacgacgaactcatgatcaccagcgccgaaggaatcataatccgc
atccctgccaccgatatctcggtccagggcaggaacacccagggcgtccgcatcatgaac
ctcaaatccggcgacaaagtcgtgggaatggcaagaataaaaaccgaaaacggtgatgat
gaaaaacagatgaaactgcccgtggcaggagaaatcgaagaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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