KEGG   Martelella endophytica: TM49_16255
Entry
TM49_16255        CDS       T03801                                 
Name
(GenBank) DNA helicase UvrD
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
mey  Martelella endophytica
Pathway
mey03420  Nucleotide excision repair
mey03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mey00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TM49_16255
   03430 Mismatch repair
    TM49_16255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mey03400]
    TM49_16255
Enzymes [BR:mey01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TM49_16255
DNA repair and recombination proteins [BR:mey03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TM49_16255
   MMR (mismatch excision repair)
    Other MMR factors
     TM49_16255
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_12 DUF134
Other DBs
NCBI-ProteinID: AJY46874
UniProt: A0A0D5LRS9
Position
3536075..3537871
AA seq 598 aa
MSSVSSNRALFLKAAEDLRSNDKQWQAYEAAGHCVLLAGPGSGKTKTLTVKLARMLSEDV
DEPRGIACITYNNECARELESRLETLGIAPGGRVFIGTVHSFSLTQILLPYAKVAGLGLP
DEFKVATRQEARAALAAAHAQVIGGPENPQNWDMRLGRHRRRFLNRELPEWRTLDPELTE
LVEAYEAELRARRLIDFDDMPLLAVRALAANEWLRTAMVAKYPILAVDEYQDLGRALHGM
VMGLCFSAGMRLFAVGDIDQSIYGFTGATPELLRRLSERDDVETVRLGLNYRCGSRIVSA
SEYALGENRGYKAPDGAHEGTIYFHPCTGGHAGHARYLVEELISEIRERRPGTNLGEIAV
LYPAAFLGDEVANAAAKHGYSVIRTDGNALYPRGSRLMRWLEQCAMWCCGGWRSGRPRLS
RVVSEGARLFHETIIDEDERLTFQRDVTAALWDRRDETLSLSDWLAALRDEIIRPRVDLA
RSLADELGILNDFLNRIGPDGDVDDFPLGEFAGIGSGLDRLNLSTLHSAKGREFDVVILF
GVDEGRLPRNNATENDVREARRLFYVGFTRARHEIHLVYAQHNPSRFVTEVQERLEGE
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtcatccgtctcgtctaacagggcactttttcttaaggcggcagaggatctgcgttct
aatgacaagcagtggcaggcctatgaagctgcggggcattgcgtgttgctggctgggcca
ggcagcggcaaaaccaagacgctgacggtcaaacttgccagaatgcttagcgaagatgtg
gacgagccacgcggtattgcctgtatcacctacaataacgaatgtgcacgggagcttgaa
agccgcttggaaacgctaggcatcgcacccggcggacgcgtttttatcggaaccgttcac
tcattctcactcacacaaattctgctaccctacgctaaagtggccggactgggcctaccc
gatgaattcaaagtggcgactcggcaggaggctcgagccgcattggcggccgctcatgcg
caggtaataggtggaccggagaacccgcagaactgggacatgcggctcggccgtcatcgt
cgccgcttcctcaatcgcgagctgccggagtggagaacgctcgatcccgagcttaccgaa
ctggtcgaggcgtacgaagccgaacttcgcgcacgccgactgatagattttgacgacatg
ccgctcctcgcagtgcgtgcgcttgccgccaatgagtggcttagaacggcgatggtggcg
aaatatccgatcctagctgtagacgagtatcaagacttgggccgtgcgttgcacggtatg
gtcatgggcctctgcttcagcgcgggcatgcggttgttcgcggtcggcgatatcgaccag
tccatctatggctttaccggcgcaacgccagagttgctgcgacgactgtccgagcgcgat
gacgtcgaaacggtgcgactaggtctcaactatcgctgcggctcgcggattgtcagcgcg
tccgaatacgcgctcggagagaaccgaggctataaggcgcccgacggtgcccatgaggga
acgatatatttccatccctgcacaggcggccatgccgggcacgcacgatatctcgtcgag
gaactgatctctgagatccgcgagcgtcgacccggcaccaatcttggcgagatcgccgta
ctgtatcctgcggcattcctcggtgacgaagtcgccaacgcggctgcaaagcatggctat
tccgtaatccgaaccgatggcaacgcgctttatccgcgcggcagcaggttgatgcgatgg
ctggagcaatgcgcaatgtggtgctgcggggggtggcgatctgggaggccccggctgtct
cgtgtagtaagcgaaggagccaggctattccacgaaactataatcgatgaggatgagcgg
ctcacctttcaacgtgacgtcaccgctgcgttatgggatcggcgggacgaaacgctcagc
ctctccgattggctggcagctctgcgtgatgaaatcattcgtccccgggtcgatctcgcc
cgatcactcgctgatgaacttggcatcctaaacgacttcctcaatcgtatcggtccagac
ggcgatgtcgatgattttccgctgggtgagtttgcgggaattgggagcggccttgatcgt
ctcaatctttcgacactgcacagtgccaaggggcgcgaattcgatgtggtaattctgttc
ggcgtggatgaaggccgattgccgcgcaacaatgctacggagaacgacgtccgtgaggct
cgacgcctcttctatgtcggcttcacgcgtgcgcggcatgagattcatcttgtgtatgcc
cagcacaacccgtcgcgcttcgtgacagaagtccaggagcgcctcgaaggtgaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (44)   

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