KEGG   Methanobacterium formicicum BRM9: BRM9_2120
Entry
BRM9_2120         CDS       T03396                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mfc  Methanobacterium formicicum BRM9
Pathway
mfc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mfc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BRM9_2120 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfc03400]
    BRM9_2120 (xth)
Enzymes [BR:mfc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BRM9_2120 (xth)
DNA repair and recombination proteins [BR:mfc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BRM9_2120 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AIS32922
UniProt: A0A089ZFN2
Position
complement(2176466..2177242)
AA seq 258 aa
MRKIRILSWNVNGIRAVHRKGFKDWFMESKPDILCIQETKATYKQFPTNIRNVEGYDLYT
SEAERKGYSGVATYTALKPEKVQKGLGIPNFDNEGRTLITDYGDFVLFNIYFPNGKMSPE
RLQYKMDFYDSFLDYADALKEEGRNIVVCGDVNTAHKEIDLARPKENEKISGFLPIEREW
IDRFLSHGYVDTFREFNQDADNYTWWSYRTRARDRNVGWRLDYFFVNQEFMDNIESSFIL
SDVMGSDHCPVGIDIKLD
NT seq 777 nt   +upstreamnt  +downstreamnt
ttgcggaaaatcagaatactttcatggaatgttaatggaatccgggctgtgcatcgtaaa
ggatttaaagactggtttatggagagtaaacccgatatactgtgtatccaggaaactaaa
gccacttacaaacagtttccgaccaatatccggaatgtggaaggatatgatctctatacc
tcagaagcagaacgcaagggatacagtggtgtggccacttacaccgccctaaaaccggaa
aaagtacaaaaaggtctgggtatccccaacttcgataatgaaggccgcacactcataacc
gactacggggatttcgttctttttaacatctacttccccaacggaaagatgtccccggaa
aggctccagtataaaatggacttttacgactccttccttgactacgccgatgctcttaag
gaagaaggacgtaacatcgtagtctgcggggatgtgaacaccgcccacaaagaaatagat
ttagcccgccctaaagaaaacgaaaaaatatcaggattcctacccattgaacgggaatgg
attgaccgattcctcagccatggttacgtggacaccttccgggaattcaaccaggatgct
gataactacacctggtggagttaccgaacccgtgcccgggaccgaaacgttggatggaga
ttggattacttctttgtaaaccaggaattcatggataacattgaatcttccttcatactc
tccgatgtaatgggctcggaccactgcccagtgggaatagatataaaattggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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