KEGG   Methanocaldococcus sp. FS406-22: MFS40622_1594
Entry
MFS40622_1594     CDS       T01175                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
mfs  Methanocaldococcus sp. FS406-22
Pathway
mfs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MFS40622_1594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfs03400]
    MFS40622_1594
Enzymes [BR:mfs01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MFS40622_1594
DNA repair and recombination proteins [BR:mfs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MFS40622_1594
 Prokaryotic type
     MFS40622_1594
SSDB
Motif
Pfam: HhH-GPD DUF123 HHH HHH_5 RecR_HhH DUF763 HHH_8
Other DBs
NCBI-ProteinID: ADC70266
UniProt: D3S602
Position
complement(1549346..1550380)
AA seq 344 aa
MELIEILLKKLNKNAVVTEIAKDRDPFKVLVSTIISARTKDEVTEEVSKRLFKEIKDVDD
LLNIDEEKLSNLIYPAGFYKNKAKNLKKLAKILKENYNGRVPDSLEELLKLPGVGRKTAN
LVITLAFNKDGICVDTHVHRICNRWEIVDTETPEETEFELRKKLPKKYWKVINNLLVVFG
REICSPKPKCDKCFEEIREKCPYYEKIKHFENILKKFNFRKVSKNNIPNEKGTYILKIRL
KEGKKIKFGKTERFFKKGYYFYVGSAFGNSVNLKNRIERHLKDDKKMHWHIDYLLKFGKV
EEIFITNEKVECEVANEFIKKFDFVENFGCSDCKCKSHLFYLKP
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggagctgatagagatactgctaaaaaaattaaacaaaaatgcagtagttacagaaata
gctaaagacagagacccttttaaggttttagtttcaacaataataagtgcaagaacaaag
gatgaagtaactgaagaggtttctaagaggctgtttaaagaaattaaagatgtagatgat
ttattaaacatagatgaggaaaaattatctaatctaatatatccagctggattttataaa
aacaaagctaagaatctaaaaaaattagctaagattttaaaagagaattataatggcaga
gttccagactctttagaggagttgttaaaactcccaggagttggaaggaaaacagctaat
ttagttataacattagcttttaataaggatggaatttgtgtagatacccacgtgcataga
atctgcaatagatgggaaatcgttgatacagaaactccagaagagacagagtttgaatta
agaaaaaagctaccaaaaaaatattggaaagtaataaataatttattagtagtttttgga
agagagatttgctctccaaaaccaaaatgtgataaatgctttgaagaaataagagaaaaa
tgcccttactatgaaaaaattaaacattttgaaaatatattaaaaaaattcaattttaga
aaggtttcaaaaaacaacattccaaatgaaaaaggaacttatatcttaaaaatcagatta
aaagagggcaaaaaaataaagtttggaaaaacagaaagattttttaagaaggggtattat
ttctatgttggttctgcctttggaaattcagttaatttaaaaaataggatagagaggcat
ttaaaagatgacaaaaagatgcattggcatattgattacctcctcaaatttggaaaagtt
gaggaaatttttattacaaatgaaaaagttgagtgtgaggttgcaaatgaatttataaaa
aaatttgattttgtagaaaactttggatgttctgattgcaaatgtaagagtcatctattt
tacttaaaaccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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