KEGG   Meleagris gallopavo (turkey): 100545924
Entry
100545924         CDS       T01523                                 
Symbol
RGPD4
Name
(RefSeq) ranBP2-like and GRIP domain-containing protein 4 isoform X1
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
mgp  Meleagris gallopavo (turkey)
Pathway
mgp03013  Nucleocytoplasmic transport
mgp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mgp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100545924 (RGPD4)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100545924 (RGPD4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgp03019]
    100545924 (RGPD4)
   03110 Chaperones and folding catalysts [BR:mgp03110]
    100545924 (RGPD4)
   04121 Ubiquitin system [BR:mgp04121]
    100545924 (RGPD4)
Messenger RNA biogenesis [BR:mgp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100545924 (RGPD4)
Chaperones and folding catalysts [BR:mgp03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    100545924 (RGPD4)
Ubiquitin system [BR:mgp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100545924 (RGPD4)
SSDB
Motif
Pfam: Ran_BP1 Pro_isomerase zf-RanBP IR1-M WH1 TPR_1 TPR_2 TPR_16 TPR_8
Other DBs
NCBI-GeneID: 100545924
NCBI-ProteinID: XP_010726561
UniProt: G1NPQ0
Position
1:132660481..132688358
AA seq 3040 aa
MFSFLQRSLKGFLFAKLYFEIKEYELAKRYISTYLSVQERDPKAHRFLGQIYEAQDNIEK
AFGCYKRSVELNPMQKDLVLKIAELLCSNDITDGRAKYWVEKAARLFPGNPAAYRLKEQL
LEHKGEDGWNQLFDMIQTELYARPDDIYLNIRLVALYRSNNRLRDAVLHCQEAEKKIPVD
SSLEWCSCVIKTFEEYLESVRDLESDKNNWRAIKKDHLLAYSSFVKMTLASRDVRESREA
LESFDRVLHSVKPYVNGPDELSRTFLEMKGHFYMHAGTFLLKMAQNNEAQWRDACELAAL
CYLKSFYIPKPKSKLIKGDPTGQDTLEMLACDRKSQSGHMLLNLSHGKEDFLKEIVESFA
NKSGLFTLFESLFGSGASRERSFLGTDDMGNVSTQAPVQGELSKYDIGAVRMHSGSLQHL
VWLGLQWNSMSVLFPLRKLLKQLFHLPQETSRLETDAPESICLLDLEVFLLGMVFTSNLQ
LQEKFNTHYGTHQPPFLPLLLCKQYCTEKQRSWWDAVRTLMQKKTTPDSATKLKLLVQHG
LSTLRALEKHGLQPALIIHWARSLQKTGTSLNSFYDQKEYIGRSVYYWKKTLLVLKTIKK
HKSVPEPTDPLFKHFHSVDIQVFQVAAYEEEAHIAFAMLDAVEGKTDDALLAFEAIKNVV
SYWNLALLCQRKAEEIESDDMLPEEQEEHKTYLLKRKHYLMKIIDESSSDPSVADKLPVS
IETVTEMLNAVIQELGENDEEESFASGNISQAANLEVKHSIPSPKKLSFSPTNTYKFSPK
TLPQWAEDHKSLLQMLCQQVEALKNEMQEMKLNSSNVSVSSHRWPAESYGTDTMSDGYQR
AQNLHEAPLTVATTGPSVYYSQSPAYNSQYLLRTAATNVTPTKAPVYGMNRLAPQQHIYA
YQQPIHTPPLQNTCAGVFPQDIYATPLRFDAPAAGIISPRGGDDYYNYGVPQASTNPPLP
EPGYFTKPSVAPTTLKPAESKVVEFSKAKFGQPGAAEGSKPPQPTTFKFNTNFKSNDGDF
TFSSPLAATQPANGAFNSSERLLKLLTSDKPLQDERCIEQKGVNSHANGQRNVFSFSNKH
TSGVSFTESVGQNAHKNLAFEKSDMFNFQEPSKQLFMTSNSDLANRSHETEGGSTHGGDE
DDDGPHFDPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDAETKEWKERGIGNVKILKHK
VSGKFRLLMRRDQVLKICANHYINTDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRF
KTPEEAVLFKSKFEECQNMLKTSGSSADASLTQSTGTVKEATNQDTKESCGSTLGILNSV
FRFSKDSVTSESDSKGSFTSTSTAPTTFSFGKEAIQTYSSGGFGQSSLKKNQWECKVCLV
PNEATAKKCVSCQSPNPDVWDTHGIPVSESAASLKAGGSATQDKLGSAFAKKEGQWDCSI
CSVRNEPTATKCVACQNPNKTNPEVSPQQFSFKLERLDAPKTTQNDLGTAFSLKGQWNCS
ICLTQNEANDENCRSCQNPNTQGQPHVPVSAVQALPAPSFTSATDASKPQKNTFAELFAK
KEGQWDCNTCFVRNEGSSPACVACQTPNPSSKPTSDVSLLTSDLKNKSSEPVGGQLGTGF
KCEFLGKSFKFGHADQGKTPAFTFQNLGDAEAKPAKEGFNFSMLMPPGGFKFGIQESSKN
TGKKDDPPKECTRDLKNIDEKDKNELPSSSGVTLQSEETADKDKGEFTFGQNSSSTFTFA
DLAKSTPSEGFQFGKKDPNFEGFSGAGEQLFSSKVSQTGPKASTSADLGEKDDDVYKTED
SDDIHFEPIVQMPEKVEPFTGEEDEKVLYSQRVKLFRFDPETSQWKERGVGNLKILKNEV
NGKVRILMRREQVLKVCANHWITTTMNLKQLSGSDKAWMWMASDFSDGDAKLEQLAAKFK
TPEQAEEFKQKFEECQKLLLDIPLQTPHKLVDTGRTAQLIQKAEEMKTGLKDLKTFLTDD
KTKLAEEENVNSACAGGTSDSVTEPHAEGTGPAVEWSNCELREEALVDSLSSSVYASPLA
SSPVRKNLFRFGESTAGFNFSFKSALSPSKSPAKQNQSGTSVGTDEDSDLTQEEERDGQY
FEPVVPLPDLVEVTSGEENEQVVFSHRAKLYRYDKDTNQWKERGIGDIKILQNYDSKQAR
IVMRRDQVLKLCANHRITPDMNMQQMKGSDRVWVWTACDFADGERKVELLAVRFKLQDVA
DSFKQTFDEAKQAQEKGTLITPHVSRTSTAKESPCGKNAVAVLEETTRERTDLSHGDDTS
DPAVEASEVSRGTSETPTKTVVSPPKFVFGSESVKSIFSNEKSKTFTFGNTSATGSLFGF
SFNPPRKSTDDISASQKAEQKKVGVAEPPKSCSASQKPSDSKASNVAPSAQDGPSNFSFK
ILEKGFNFSLFKSNPMAFWTSTSSLQPASKAEKTAEPSDTPPSDDVMIVYELTPTPEQRA
LAGFLKLPSTFFCYKNKPGYVSEEDDDEDYETAVKKLNGRLYPSNEKEKRKWQVGTPVKQ
ELERECVTTSETKLPEEKAEEETPQVTSTSVCGISSNAEDASPEGSQKEANTQKKKENEV
TSSAADIVSTSEEELHTPSTSEAATVFVQSAASSEEADSTEAAHVSQNLPGGDDKPVDLS
TKKESDSESSESTQEHKPISFGFGNASGLSFADLASKNSGDFAFGSKDKNFKWANTGAAV
FGVQPASKADEDEGGSDDEVVHSDDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWD
RDATQWKERGVGELKILFHTQKKYYRILMRRDQVLKVCANHVITKEMNLVPSDTSNNVLI
WTATDYADGEVKVEQFAVRFKVQELANSFKRRFEECQQSLSELQKGHLSLAAELSKDTNP
VVYFNVSANDEPLGRITMELFSNIVPRTAENFRALCTGEKGFGFKNTTFHRIVSDFICQG
GDITNHDGTGGRSIYGEAFEDENFEVKHTGPGLLSMANRGRDTNNSQFFITLKKAEHLDF
KHVVFGFVKDGMDVVKKIESFGSPKGLVNGRVVITDCGQT
NT seq 9123 nt   +upstreamnt  +downstreamnt
atgttttctttccttcagagatcgttgaaaggattcctttttgctaagctgtattttgag
ataaaagaatatgaacttgctaaaagatatatttctacttatctcagtgtccaagagaga
gatcccaaagctcacaggtttctgggacagatttatgaagctcaggataacatagaaaaa
gcttttgggtgttacaagcgttctgtggagctgaatccaatgcagaaagatcttgtactg
aagattgcagagttactatgcagtaacgacatcactgatggaagagccaagtactgggtt
gagaaagctgccaggctcttccctgggaatcctgctgcttacagattgaaggagcagtta
ctggagcataaaggtgaagatggatggaatcagctctttgatatgattcaaacagaactc
tatgcgagaccagatgatatctaccttaacatcagactggttgctctctaccgttcaaat
aataggttaagagatgctgtgcttcattgtcaggaggcagaaaagaaaatacctgtagac
tcaagcttggaatggtgttcgtgtgtcataaagacatttgaggaatacctcgaatcagta
cgagacttggagtctgataaaaataattggagagctatcaagaaagatcatctgctggcc
tattctagcttcgttaaaatgacacttgcttctagagatgttcgagaaagcagagaggca
cttgaaagttttgatcgtgtgcttcactctgtgaaaccgtatgtgaatggacccgatgag
ctgtctcgtaccttccttgaaatgaaaggacacttctacatgcatgctggaactttcctg
ctgaaaatggcccagaacaatgaggcacaatggagagatgcatgtgaactcgcagcgttg
tgttatttgaaaagtttctatatacctaaaccaaagtcaaaactaataaaaggagatcct
actgggcaagatacgctggaaatgttggcctgtgaccgaaaaagccagtctggtcatatg
ttgctgaacttaagccatggcaaggaagactttttgaaagagattgtggaatcttttgca
aacaaaagtggtttatttacattgtttgaaagcctctttgggagtggagcttctagagag
agatctttccttggcacagatgatatgggaaatgtcagtacacaagcaccagtgcaagga
gaactgagtaaatacgatattggtgctgttcgaatgcacagtggtagtctccagcacctt
gtttggcttggcttgcagtggaattctatgtcagtgttattcccactgcggaaattatta
aaacagctttttcacttgccacaagaaacatcaagacttgaaacagatgctcctgaatcc
atttgcttgctggaccttgaagtttttttactcgggatggtgttcactagcaacttacaa
ttgcaagagaagtttaatactcactatggcacacatcagcctcctttcttaccattgctg
ctgtgcaaacagtactgtactgagaagcaaagatcctggtgggatgcggttcgtacactt
atgcagaaaaaaacaacgccagactcagcaacaaaactgaagcttcttgtacagcatgga
ttaagtactctgcgagccctggagaaacacggccttcagcctgccttaattatccactgg
gcaagaagcctgcaaaaaacaggcactagccttaactccttctacgaccagaaagaatat
attggaagaagtgtctattactggaagaaaactttgcttgttttgaaaactatcaaaaag
cacaaaagtgttcctgagcctactgatcctctcttcaaacatttccatagtgtggacatt
caggtttttcaggttgcagcctatgaagaagaggcacatatagcatttgcaatgttggat
gcggttgaaggcaaaactgatgatgctttattagcatttgaagctattaagaacgtggtt
tcatactggaatcttgccctactttgccaaagaaaggcagaggagattgagagtgacgat
atgttgccagaagaacaagaagaacacaaaacctatcttcttaaaagaaagcattatctg
atgaagatcatcgatgaaagctcctctgatccatcagtagctgacaaactgccagtatct
attgaaaccgtaacggaaatgctgaatgcagtgatccaggagcttggagagaatgatgaa
gaggaaagtttcgcatccggaaatatctcacaagctgcaaatctggaagtaaaacattca
attccatcacctaagaagttatctttctcaccaactaatacctacaagttttctcctaaa
actctccctcagtgggcagaagatcacaagtccttacttcaaatgctgtgtcagcaagtg
gaagctttaaagaatgaaatgcaagaaatgaaacttaacagttccaatgtaagtgtatca
tctcatcgatggcctgctgaaagctatggaactgatactatgtcagatggttatcagaga
gcacaaaatcttcatgaagctcctttaacggttgctaccactggcccatctgtttactat
agccagtcacctgcttataactcacagtatcttttaagaactgctgcaaccaatgtaaca
ccaacaaaggcacctgtctacggcatgaacagacttgcacctcagcaacacatatacgct
tatcaacagccaatccacacgccacctctgcaaaacacttgtgctggtgtgtttcctcaa
gacatctatgctacacctttgcgttttgatgctcctgctgctggaattatttcacctcgt
ggaggtgatgattactacaactacggtgttccacaggcgagcacaaatccaccactacct
gaaccgggctatttcacaaaaccttcggttgcacccacaactttaaaacctgcagaatcc
aaagtggtagagttttcaaaagctaaatttgggcagccgggagcagctgaagggtcaaag
ccacctcagccaacaacctttaaattcaacactaacttcaaatctaatgatggggacttt
accttttcttctcctttagctgccacacagcctgctaacggagcttttaatagcagtgaa
cgccttttgaagcttttaacatcagacaaacccttacaagatgagaggtgcattgaacaa
aaaggagttaacagtcatgcaaatggccaaagaaatgtcttcagtttcagtaataaacat
acttcaggtgtctcttttacagaaagcgtgggacaaaatgcacataaaaacctggctttt
gaaaagagtgatatgtttaacttccaagaaccaagcaaacagttatttatgacttcaaat
tctgatttggccaatagaagtcatgaaacagagggaggaagcacccatggtggagatgag
gatgatgatggacctcattttgaccctgtggtgccactccctgacaagattgaagtaaag
acaggcgaggaagatgaagaagagttcttctgcaacagagctaaacttttccggtttgat
gcagaaactaaagaatggaaagaaaggggtattggaaatgtgaaaatactgaaacacaaa
gtatctggcaaattccgtctcttaatgagaagggaccaagtactaaaaatctgtgcaaat
cactacataaatactgatatgaaattaactccaaatgctggatcagataggtcgtttgta
tggcatgctttagattatgcagatgagctgccaaagccagaacagcttgcaattcgattt
aaaacaccagaggaagcagtgctttttaaaagtaagtttgaggagtgtcagaatatgtta
aaaacttcaggatcaagtgctgatgcatccttgactcagagcactggaactgttaaagag
gcaacaaatcaagataccaaggagtcttgcgggtcaacattagggatcttgaactccgta
tttcggttctcaaaagatagtgtgaccagtgaatctgatagcaaaggcagttttacatca
acgtcaactgcccctacgactttttcatttggaaaggaagccatacaaacctattcctct
ggcggatttggacagtcttccttgaagaagaatcagtgggagtgtaaagtatgtttagtt
ccgaatgaagcaactgctaagaagtgtgtctcatgccaaagcccaaatccagatgtgtgg
gacacacatggcatcccggtaagtgaatctgctgcaagtttgaaagccggtggtagtgcc
acacaagacaaattaggatctgcctttgctaaaaaggaaggtcagtgggactgtagtatc
tgttcagtaagaaatgaacccactgccacaaaatgtgttgcctgccagaatccaaataaa
actaacccagaagtatctcctcaacaattttcctttaaacttgaacgactagatgctcca
aagaccacgcagaatgacttggggactgctttttcactgaaaggtcagtggaactgctcc
atatgcctcacccagaatgaagcaaatgacgaaaactgtcgttcttgtcagaatcctaac
actcaaggtcaaccacatgtgccagtatctgctgttcaggcacttcctgctcccagcttt
acttctgctactgacgcaagtaaaccacagaaaaatacatttgcagagctttttgctaaa
aaggaaggacagtgggattgtaatacttgttttgtaaggaatgaaggttcctcaccagct
tgtgtagcttgccaaacaccaaatccatctagtaagcctaccagtgatgtttcattgttg
acttctgatttgaaaaataaatcatctgaacctgttggaggacaactgggaacaggtttt
aagtgtgaattcttaggaaaaagctttaagtttggtcatgctgatcaagggaaaacacca
gcatttacatttcagaatcttggagacgctgaagcaaaacctgcaaaggaaggatttaac
ttttcaatgttgatgcctccaggtggatttaaatttggcatacaggaatccagtaaaaat
accggtaagaaagatgatccacccaaagagtgtacaagagacttgaaaaacattgatgaa
aaagacaaaaatgaactgccttcaagtagtggagttacactccaatctgaggaaacagca
gacaaggacaagggtgaatttacttttggccaaaacagtagtagtacttttacttttgct
gatcttgcaaaaagtacccccagtgaaggctttcagtttggcaaaaaagatcctaacttt
gaaggcttctcaggtgcaggtgaacagctgttttcttcaaaggtttctcagactggtccc
aaagcaagcacctctgctgatcttggtgagaaggatgatgatgtgtacaagactgaggac
agcgatgatatccattttgaaccgatagttcagatgcctgaaaaagtagaaccattcaca
ggagaggaggatgagaaagtgctgtactcccaaagagtaaagctattcaggtttgatcca
gaaacaagccagtggaaagaacgtggggtgggcaacctgaagattcttaaaaatgaagtt
aatggcaaagtaagaatactaatgcgacgtgagcaggtactgaaggtgtgtgcaaatcac
tggataacaacaactatgaacttgaaacagctatcgggctcagacaaagcatggatgtgg
atggccagcgacttctctgatggcgatgcaaagctggaacagctggcagcgaagttcaaa
acaccagagcaggctgaggagttcaaacagaagtttgaagaatgtcagaagctactgcta
gatataccactgcagacaccccataaacttgttgatacaggcaggacagctcagcttata
cagaaagcagaagaaatgaagaccggcttaaaagatctcaaaacgtttctgacagatgac
aaaactaaactagcagaagaagaaaacgtaaactctgcttgtgccggtggtacttctgat
tctgttacagagccacatgctgaaggtactgggcctgctgtggagtggagtaactgtgag
ttgcgtgaagaagcattggttgacagtttaagtagctctgtatatgcatcgcctcttgca
agtagccctgtaaggaaaaatctgtttagatttggagagtctacagcaggctttaatttc
agctttaaatctgccttgagtccatccaaatctcctgccaagcagaaccagagtggaaca
tctgtgggcacagatgaagattctgatcttactcaagaagaggagagagatgggcagtac
ttcgaacccgtagtacctctgcctgaccttgtggaagtgactagtggcgaggaaaatgag
caagttgtcttcagtcatagagctaaactttatagatacgataaagacacaaatcagtgg
aaggagagaggtattggggacatcaagatactgcagaactatgacagcaaacaagcacgt
atagtaatgagaagggatcaggtactaaaactctgtgccaaccacagaataacaccagat
atgaatatgcaacagatgaaaggatctgacagagtatgggtgtggaccgcatgcgatttt
gcagacggggaaaggaaagtagagctgctagcagtgcggttcaaactgcaggatgttgca
gactcatttaagcaaacttttgatgaagcaaagcaagcccaagagaaaggcacactgata
acacctcatgtttctcgtacaagtacagcaaaagaatctccttgtggtaagaacgctgta
gctgtactggaagaaactaccagggaaagaactgacctcagccatggtgatgatacttct
gatcctgctgtggaagcttcagaagtatcaagaggtacctctgaaacgccaacgaaaaca
gtggtttctcctccaaagtttgtatttggatctgaatctgtcaagagcattttcagtaac
gaaaagtcaaagacattcacatttggaaatacttcagccactggttccctctttggattc
agctttaatcctccaagaaaaagcacagatgatatttcagcatctcagaaagcagagcag
aaaaaagtgggagtggctgaaccacccaaaagctgcagtgcatctcagaaaccttcggac
agcaaggcatccaacgtggctccttcagcacaagatgggccctccaacttctcgtttaaa
attctggaaaaaggatttaattttagcctttttaaatctaatccaatggccttttggaca
agcacatcttccttgcaacctgctagtaaagctgagaagacagctgaaccttcagacact
ccaccatctgatgatgttatgatagtgtacgagctcacacctaccccagagcagagagct
ctcgcaggctttcttaagctaccttcaaccttcttctgttacaagaataagcctggatat
gtgagtgaagaggatgacgatgaagactatgaaacagcagttaagaaacttaatggaaga
ctgtatcctagcaatgaaaaagaaaaaagaaaatggcaagtaggcaccccagtcaaacag
gaattggagagggaatgtgttactacttctgaaactaaacttcctgaggagaaggctgaa
gaagagactccacaggtcacttccacatctgtctgtggcattagtagtaatgcggaagat
gccagtccagaaggctctcagaaagaagctaacactcagaaaaagaaagagaatgaagtt
acaagctcagcagctgacatagtctctacaagtgaggaagaattacatactccatcaact
agtgaagcagcaacggtatttgtgcagtcagctgctagcagtgaagaagcagattccaca
gaagctgctcacgtatcacagaatttaccaggaggtgatgataaacctgtggacctgtca
actaaaaaagaaagtgattctgaatcttctgagtcaacacaagaacacaaacccatctca
tttggctttggtaatgcttcaggcttgtcgtttgcggatctggcttccaagaactctgga
gacttcgcttttggctctaaagataaaaacttcaagtgggcaaacacaggagcagctgtt
tttggagtacagccggcaagtaaggcagatgaagatgaaggtggtagtgatgatgaggtg
gtacacagtgatgatatccactttgagccaattgtctccttaccagaggtggaggtaaag
tctggagaagaagatgaagaaattctcttcaaagagagggcaaaactttacaggtgggac
agagatgctactcagtggaaggagcgtggtgttggagagcttaagatccttttccataca
cagaagaaatattacaggatccttatgagaagggaccaagttcttaaagtgtgtgcaaac
cacgtcatcaccaaagaaatgaatttagtgccctctgatacatcaaacaatgttttaatt
tggacagctacagattatgctgatggtgaagtgaaagtagaacaatttgcagtcagattt
aaagttcaagaactggctaattctttcaagaggagatttgaagaatgccagcaaagcttg
tcagagctacagaagggccacctctctctggcagcagagctgtcaaaggacaccaaccct
gttgtgtattttaacgtttctgccaacgatgaacctttaggacgcataaccatggagctg
ttttcaaatattgtccctcgaacagctgaaaatttcagggccctgtgcacaggggagaaa
ggcttcggattcaagaataccacgtttcacagaatagttagtgacttcatatgtcaggga
ggtgatataacaaaccatgatggaacaggtggacgatcaatttatggagaagcatttgaa
gatgagaattttgaagtgaaacatactggtcctggcttgctgtcaatggcaaataggggc
agggatacgaataactctcagttcttcataacgctcaaaaaagcagaacacttggacttt
aaacacgtggtatttgggtttgtgaaagatggaatggatgtcgtgaaaaagattgaatcc
tttggttctcctaaagggctagtaaatggaagagttgtcattacagactgtgggcaaaca
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (25)   

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