KEGG   Pyricularia oryzae: MGG_08804
Entry
MGG_08804         CDS       T01027                                 
Name
(RefSeq) Clp1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
mgr  Pyricularia oryzae
Pathway
mgr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mgr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MGG_08804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgr03019]
    MGG_08804
Enzymes [BR:mgr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     MGG_08804
Messenger RNA biogenesis [BR:mgr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     MGG_08804
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 CbiA AAA_16 nSTAND3 ATP_bind_1 ArsA_ATPase
Other DBs
NCBI-GeneID: 2678970
NCBI-ProteinID: XP_003719167
UniProt: A4QQE0
Position
6:66797..69396
AA seq 455 aa
MSIPGLGLIPEKPATSASRTYTLEPRQEYRFSVSHGASITITLTRGTAERDGTELALNVA
YTLSGVKSKILSWHGANLSIEGITDHESVAGPDDAANTAHLNLHAFLQRSREAAARNNGG
GRSAPHGPRVLVAGKTGCGRTSLVRTLAAWATRTGAQPMVVDADPGEGLLTLPGTLSAAV
FGTVMDVASEGGWGAAPSSGPSAVPVKLPLVFYYGRRRVEEDRDLYKGVVNSISSAISAR
AADDPAVRSAGMLIDTPPYVEGKGADVLIHIAEELNVNIIVTIDTPSLHTELTQRFSGVK
NVLGEHVSVVALDKSSGVMERDEGFLQHMGEASIKEYFFGDAKITLSPFTQQVAFDELAI
YTSPEASDYSAEPGALERIPQPLPEMAHWVLAMMDAAPNDPPHKIRYAPVSGFVYVAAVD
KERRRMKILAPVSGRLGDKPLVWGKWPEPHINLLG
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtctatcccgggtttggggctcatccccgagaagcctgcaacctcagcctcccgaaca
tacacccttgaaccgcgtcaggaataccgcttctccgtctcgcacggcgcgtccatcacc
atcaccctcaccaggggcacggccgagcgcgacggcaccgagcttgccctcaatgtcgcc
tacaccctgtcgggcgtaaagtcgaaaatcctctcctggcacggcgccaacctctcaatt
gagggcatcacagaccacgaatccgtcgcgggccccgacgacgccgcgaacaccgcacac
ctgaacctgcacgcgttcctccaacggtcccgcgaggccgcggccaggaacaacggcggc
ggccgctccgcaccccacgggccgcgcgttctcgtggccggcaagacgggctgcggccgc
acgagcctggtgcggacgctggcggcgtgggcgacgcggacaggcgcgcagcccatggtg
gtagatgcggatccgggggaggggttgttgacgctgcctggcacgctgtcggcggctgtt
ttcgggacagtcatggacgtagcgagcgagggtgggtggggtgcagcgccgagcagcggg
ccgagcgccgtgccggtcaagctgccgctcgtgttctactatgggcggcggcgggtggag
gaggatagggatctctacaagggggtcgtcaattctatctcgtcggccatctcggccagg
gcggcggatgatccggctgtcaggagtgccgggatgctgatcgatacaccgccttatgtg
gagggcaaaggggctgatgtgttgattcacattgcagaggaattgaatgtaaacataatc
gtgacgattgatacgcccagcttacacacggagcttacgcaaagattttctggcgtcaaa
aacgttctcggggagcacgtatccgtggtggcgctggacaagtctagtggcgtcatggag
agggacgaaggtttcttgcagcacatgggagaagcgagcatcaaggagtattttttcgga
gatgccaaaatcactctcagccctttcactcagcaggtcgcctttgatgagctggccatc
tacacgtcacccgaagcttctgactattcagctgagcctggggcattggagcgaatcccg
cagccgctgcctgaaatggctcactgggttctggcaatgatggacgcggcacccaacgac
ccgccgcacaagattcggtatgcgcccgtgtcgggattcgtgtacgtcgccgccgtggac
aaggaaaggcggcggatgaagatcctggcccccgtcagcgggagactcggagacaagccg
ctggtctgggggaaatggcccgagcctcacatcaaccttctcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

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