KEGG   Mycobacterium haemophilum: B586_19080
Entry
B586_19080        CDS       T04111                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mhad  Mycobacterium haemophilum
Pathway
mhad03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    B586_19080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhad03400]
    B586_19080
Enzymes [BR:mhad01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     B586_19080
DNA repair and recombination proteins [BR:mhad03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     B586_19080
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 Viral_helicase1 AAA_11 AAA_22 Helicase_RecD UvrD-helicase SH3_13 AAA_16 PhoH nSTAND3 NTPase_1 AAA_28 AAA_5 ATPase Mg_chelatase SRP54 TrwB_AAD_bind AAA_29 MukB SLFN-g3_helicase NACHT DUF3035 CbiA
Other DBs
NCBI-ProteinID: AKN18209
Position
complement(693907..695664)
AA seq 585 aa
MSSISNTDIEDPLDWRIALGASGLLRIFNEAGLLESADVHVAQRLTVLAGEHGNSNGAVA
LAVALAARALRGGSVCVDLHTVATDSGIPDLPWPDPTTWLAALRASPLLGEPPVLRLYDD
RLLYLDRYWREEEQVCADLLALSVPTARVEISGYERLFPPQFAEQRAAAEIALSQAVTVL
TGGPGTGKTTTVARLLALLAEQAGVSGTPGLRIALAAPTGKAAARLTQAVAVEVGELDAG
DRERLSDLHAVTLHRLLGSRPDTSTRFRHHRGNRLPHDVIVVDETSMVSLTMMARLLEAV
RPDARLILVGDADQLASVEAGAVLADLVDGLSARSDVRVATLRTSHRFGAAIGALAEAVR
LGDTDEVLALLRSGDEHVEFIEDSDPTARLRAIVLPHALRLREAARLGATDVALATLDEH
RLLCAHRQGLCGVQHWNQQVHNWLAEETDQPAWSQWYAGRPLLVTANDYGLRVYNGDTGV
VVAGPDGLRAVIAGAAGPVSLATSRLSDIETMHAMTIHKSQGSQADAVTVLVPPQDSRLL
TRELFYTAVTRAKTKVRVVGSETEVAAALERRAVRATGLRLRLQT
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgagcagcatcagcaacacagacatcgaggacccgctggactggcggatagcccttggc
gccagcggcttgctgcggatattcaacgaagccggtctgctggaatctgctgatgtgcat
gtagcgcaacggcttaccgtgctcgctggtgagcacggtaatagcaatggggcagtggcg
ttggcggtggcgttggcggcccgggcattacgcggcggatcggtgtgcgtggacctgcac
acggtggccaccgattccggtatccccgacctaccgtggccagaccccacgacgtggctg
gcggcattacgggcgagtccgttactgggcgagccaccggtgttgcgactgtatgacgac
cggttgctctacctcgaccgatactggcgggaggaagagcaggtgtgcgccgacctgctc
gcgctgtctgtcccgacggcgcgagtcgaaatatccggctatgaacgccttttcccaccg
cagttcgccgaacagcgggcggccgcagagatcgcgttgtcacaggccgttaccgtgctg
accggcggtccgggcaccggcaagaccaccacggtcgcgcggctgctcgcgctgctcgcg
gaacaggcgggcgtttccggaactcccggtctgcggatcgccttggccgcacctaccggc
aaggcggcagcgcggttgacccaagcggtggcagtcgaggtcggagagctcgacgccggt
gaccgtgaacgcctttccgacttgcacgcagtaacgctgcaccggctgttgggtagccga
ccagacacatcgacacggtttcggcaccatcggggcaaccggctgccccacgacgtgatc
gttgtcgacgagacatcgatggtgtcgctgacgatgatggcccggttgcttgaagcggtg
cggcccgacgcccggctgatcctggtcggcgacgccgaccagctggcatcggtggaagcc
ggcgcggtgctggcagatctggtcgacggcttgtcggcgcgcagcgacgtgcgggtggcg
acgttgcgaacctcgcaccggttcggcgcggcgatcggcgccttggccgaggccgtccgc
ctcggcgacaccgacgaggtgctggcgctgcttcgctccggagatgaacatgtcgagttc
atcgaagacagcgacccgacggcgcggttgcgcgcgatcgtgctgccccatgcgttgcgg
ctgcgggaggcggcgcgattgggagccaccgacgtggcgttggcgacgctggacgaacac
cggctgctgtgcgcgcaccggcagggtctttgtggtgtgcagcactggaaccagcaggtg
cacaactggctggccgaggagacggaccagccggcgtggtcgcagtggtatgccggacgg
ccgctgctggtgacggcaaacgattacgggctgcgcgtctacaacggcgacaccggtgtc
gtggtcgctggccccgacggtttgcgtgccgtcatcgccggcgctgccggtccggttagc
ctcgcgaccagccgcctctctgatatcgaaaccatgcacgcgatgaccatccacaaaagc
caaggaagccaggccgatgcggtcacggtgctggtgccgccgcaggattcgcggctactt
acccgggagctgttctataccgccgtgacccgggccaagaccaaggtccgggtggtcggc
tccgaaaccgaagtcgccgctgcgcttgagcggcgggccgtgcgggcgacggggctgcgg
ttgcggctgcagacttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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