KEGG   Marinobacter nauticus ATCC 49840: MARHY0468
Entry
MARHY0468         CDS       T02083                                 
Symbol
rpoZ
Name
(GenBank) RNA polymerase, omega subunit,chaperone-like function in RNAP assembly and stabilization
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mhc  Marinobacter nauticus ATCC 49840
Pathway
mhc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mhc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MARHY0468 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhc03021]
    MARHY0468 (rpoZ)
   03400 DNA repair and recombination proteins [BR:mhc03400]
    MARHY0468 (rpoZ)
Enzymes [BR:mhc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MARHY0468 (rpoZ)
Transcription machinery [BR:mhc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MARHY0468 (rpoZ)
DNA repair and recombination proteins [BR:mhc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MARHY0468 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: CCG93967
UniProt: H8WEB1
Position
509686..509898
AA seq 70 aa
MARVTVEDCLENVDNRFQLVMLATKRARQIATKGAEPMVAEENDKPTVIALREIAEGKVT
RDLLLEEDDD
NT seq 213 nt   +upstreamnt  +downstreamnt
atggcacgagttaccgttgaagattgtctggaaaacgtagataaccgattccagctggtc
atgctggccaccaaacgcgcccgccagatcgccaccaagggtgccgagccgatggttgcg
gaagagaatgataagccgaccgttattgccctgcgtgagattgcagaaggcaaggtgacc
cgcgatcttctgctggaagaagacgacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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