KEGG   Megamonas hypermegale: MHY_18220
Entry
MHY_18220         CDS       T02593                                 
Name
(GenBank) Transcription-repair coupling factor (superfamily II helicase)
  KO
K03723  transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
Organism
mhg  Megamonas hypermegale
Pathway
mhg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MHY_18220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhg03400]
    MHY_18220
Enzymes [BR:mhg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MHY_18220
DNA repair and recombination proteins [BR:mhg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     TRCF (transcription-repair coupling factor)
      MHY_18220
SSDB
Motif
Pfam: TRCF Helicase_C RecG_dom3_C Yqai
Other DBs
NCBI-ProteinID: CBL06576
Position
complement(1355511..1356686)
AA seq 391 aa
MSLVGARDMSVIETPPQERFPVQTYVIENNDMIIKDAIKREIRRGGQVYFIYNRVETIDK
MYLHLLSMLPDVKIGIAHGQMSEEELERAMLNFYEGKYDILLATSIIENGLDVSNANTII
IYDADYFGLSQLYQMRGRVGRSKQMAFAYFIYQKDKILSEMAEKRLQAIKEFAQLGSGFK
IAMRDLEIRGAGDLLGSQQHGHISSVGFEMYCRLLEEAVETLQTGKEPEKVVEPIIELKE
DAYLDGEYINNATNKIEIYQRIAAIRTDEHADQLEEELIDRFGALTEPVKKIMQVARLKN
YARKLKIKSIIEKPAFVEICFDKAPNIEPENMLLAKKQFDNLLKFVPKQNTIQIKITPIN
KKHIINLCLKVVKVLTGEKLQKMTLKKEEKK
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgtctcttgtaggtgctagagatatgtctgttatcgaaacaccaccgcaagagcgtttc
cctgtgcagacttatgtaattgaaaataatgatatgattatcaaagacgctattaagcgt
gaaattcgccgtggtggtcaggtatattttatttacaatagagtagaaactatagataag
atgtatttgcatttattatctatgcttcctgatgtaaaaatagggatagctcatgggcag
atgagtgaagaagaattagaaagagctatgctcaatttttatgaaggaaaatacgatatc
ttattggctacaagcattattgaaaatggtttagatgtatcaaatgccaatactataatt
atttatgatgcagattatttcggtctatctcagctctatcagatgcgaggtcgtgtaggt
cgttctaaacaaatggcttttgcatactttatttatcagaaagataaaatcttatctgaa
atggcagaaaagagattacaggcgataaaagaatttgctcaattaggttctggatttaaa
atcgctatgcgagatttagaaattcgcggtgctggtgatttattggggtctcaacaacat
ggtcatatttctagtgtaggttttgagatgtattgtcgtctattagaagaagcagtagaa
acattgcaaacaggtaaagagccagaaaaagtagtagaaccgataattgaattgaaagaa
gatgcttatttagatggagaatatataaataatgccactaataagattgaaatttatcaa
cgtattgcagcgatacgaacagacgaacatgcagaccaattagaggaagaattaatcgac
cgttttggtgcattgactgaacctgtaaagaaaataatgcaagtagcacgcttgaaaaat
tatgctcgtaaattaaaaataaaatctattattgaaaaacctgcttttgtggaaatatgt
tttgataaagcaccaaatatagagccagaaaatatgcttttagcgaaaaagcaatttgat
aatctattaaaatttgtgccaaaacaaaatacgatacagataaaaattacgccaataaat
aaaaagcatataataaatttatgtttaaaagtagtaaaagttttaacaggtgaaaaatta
cagaagatgactcttaaaaaagaggagaaaaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system