KEGG   Metamycoplasma hominis ATCC 27545: MLBD4_02470
Entry
MLBD4_02470       CDS       T03410                                 
Symbol
recD
Name
(GenBank) RecD/TraA family helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
mhom  Metamycoplasma hominis ATCC 27545
Pathway
mhom03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhom00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MLBD4_02470 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhom03400]
    MLBD4_02470 (recD)
Enzymes [BR:mhom01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     MLBD4_02470 (recD)
DNA repair and recombination proteins [BR:mhom03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     MLBD4_02470 (recD)
SSDB
Motif
Pfam: AAA_19 AAA_30 UvrD_C_2 SH3_13 AAA_11 Viral_helicase1 UvrD-helicase AAA_22 PIF1 SLFN-g3_helicase AAA_12 nSTAND3 DEAD RNA_helicase ATPase AAA AAA_16 ResIII AAA_14 GvpD_P-loop AAA_7 RsgA_GTPase NTPase_1 ABC_tran_Xtn Sigma54_activat
Other DBs
NCBI-ProteinID: AIU34195
Position
555353..557596
AA seq 747 aa
MLQNSNIQGKFNKIMWTSTDGRVVIVSFLVSSNDGLNPVKVNKYNSISVTLKNNLFSEKN
ITLNSHIYEISVSKNSFSKYPNSYIATDVIEINEDEEYKLNYVIKFLKSSHFPGIGEEKA
KLIVKDLGIDALKKMVEDNSIDYSKYSISELTWNYAVEFIKNNPTLIEDQMFFLTNNLTP
SLYEIVAKKFEHFKDFIDAYKDNFYLFYLDNERISLEDMDKLHNIFNKFEHPFKPATHLY
KSFLKYLYNSGNTRILKDYLYDQLINFASQDTEWPRDVETFNNSVELLVQNKYLIEIEYE
DGTYLSAKDVFDMEKYIVKRLKHIESSSNPKFINFMPSEMFHPLQLQAIETALTSKLTLI
TGNPGTGKTLITNEIIKQLLSVYDEDDLAIVTPTGRATININNIQEKTNAVTIHSFLEWD
VDNDKFMINEKNAKPIECLIIDEFSMVSVDLFYSLLKGIKKNSLKRIILVGDKDQLPAIG
AGYLIRDFIESNIFQTIVLSKIFRQAENFDIIQDALDINKGKLPEFKGNNSQFIETKQSD
LKSMLLFKLNDLLQQGYSKRDIAILSPIYNYETGIDQINETLNNFFRKLDGNEQIKYRDH
VLAIDDKVINLVNDPKTKVFNGEIGYISHFGFENKKNSFEKVLASISVDFENDSKTVSYS
RKDFFANTYPAYCTSVHKYQGSECKCVIVVLFSEAKKLLSKKLIYTAITRAKKYCVVIGE
KEALITGINNDDDSNRITNIKYLWRNE
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgttacaaaatagcaatattcaaggtaaatttaataaaataatgtgaacgtctactgat
ggccgagttgttatagtttcatttttagtatcttctaatgatggtttgaatcctgttaaa
gttaataaatacaacagtatttcagtaactttaaaaaacaatttattttctgaaaaaaac
attactttaaatagccacatttatgaaatatcagtctctaaaaatagtttttcaaaatat
ccaaatagttatattgcaacagacgttattgaaataaacgaagatgaagaatataaacta
aactatgttattaaatttttaaaaagcagtcatttccctggtataggcgaagaaaaagca
aaattaattgtaaaagatttagggattgacgctttaaaaaaaatggttgaggataattca
attgattattcgaaatattcaatatcagaattgacatgaaactatgctgttgaatttatt
aaaaataatccaacattaattgaagatcaaatgttctttttaacaaataatttaacacct
tctttgtatgaaatagttgctaagaaatttgaacattttaaagattttatagatgcttac
aaagataacttttacttattttatttagacaatgaacgcatctcgcttgaagatatggac
aaattacataatatctttaacaaatttgaacatccttttaagcctgcaactcacttgtac
aaatcatttttaaaatatctatataattctggaaacactagaattttaaaagattattta
tacgaccaactaataaactttgcaagccaagacactgaatgacctagggatgttgaaaca
ttcaataatagcgttgaattattggttcaaaataaatatttaatcgagattgaatacgaa
gatggtacataccttagtgctaaagatgtatttgatatggaaaaatatattgtcaaaaga
ttgaaacatattgaatcttcttcaaacccaaaattcatcaattttatgccaagcgaaatg
ttccaccctttgcaacttcaagcaatagaaacagcactaactagcaaattgacattgatt
acaggaaaccctggcactggaaaaacattgataactaatgaaataattaaacaactgctt
tcagtctatgatgaagatgatttggcaatagttacaccaaccggtagagcaactatcaac
ataaacaatattcaagaaaagacgaatgccgttaccatacatagttttttagaatgggat
gttgataatgacaaattcatgattaatgaaaaaaatgcaaaaccgattgaatgtttaata
attgatgaattttcaatggtaagtgttgatttattttattcactacttaaaggaataaaa
aagaattcattaaaacgaatcatattagttggcgacaaagatcaattgcctgccattggc
gctggttatttaattagggattttatagaaagcaatatttttcaaacaattgttttaagt
aaaatttttagacaagcagaaaattttgacattattcaagatgctctagatattaataaa
ggcaaactacccgaatttaaaggaaataattcccaatttattgaaacgaaacagagtgat
ctaaagtcaatgttactctttaaattaaatgacttattgcaacaaggctatagcaagcgt
gatattgcaattttaagtccaatatataattacgaaacgggaattgatcaaataaatgaa
acattaaataatttctttagaaaattagatggcaatgaacaaataaagtatcgagaccat
gttttggccattgatgataaggtaataaatttagttaatgatccaaaaacaaaagtgttt
aatggagaaatcggttatatatctcactttggctttgaaaacaaaaaaaattcatttgaa
aaggttttagcaagtatctctgtagattttgaaaacgattcaaaaactgtttcttattct
agaaaagatttttttgctaatacatatcctgcatattgcacaagcgttcacaaatatcaa
ggtagtgaatgtaaatgcgttattgtagtattattttcagaggctaaaaaattattatct
aaaaaacttatttataccgctattactagagcaaaaaaatattgcgttgttattggagaa
aaagaagctttgataaccggtataaataatgatgatgattcaaatagaataaccaatatt
aaatatttatggaggaatgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (25)   
   Pfam (25)   
All databases (34)   

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