KEGG   Mannheimia haemolytica USDA-ARS-USMARC-183: D650_19260
Entry
D650_19260        CDS       T02523                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
mhq  Mannheimia haemolytica USDA-ARS-USMARC-183
Pathway
mhq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mhq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    D650_19260 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhq03400]
    D650_19260 (recB)
Enzymes [BR:mhq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     D650_19260 (recB)
DNA repair and recombination proteins [BR:mhq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     D650_19260 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 ResIII AAA_12 DEAD AAA_25 AAA_11 NEPRO_N
Other DBs
NCBI-ProteinID: AGI33195
Position
complement(1847412..1850936)
AA seq 1174 aa
MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNPLTVEQILVVTFTKAAT
EELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQIYPLIPNIHEALLRLSIA
EREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQSDLLKKLSEEVWREQFYPQDL
AITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQDIAEHLAQYQQFINEVKSYWKTH
SDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMNQWANSQHNHFPAGLYLFTTEKIAA
GTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSAMLQYQFLIALKAKLAEYKQSHPQRSF
DDLLTMLNQALKNLHTGEALSQKIRAMYPFAMIDEFQDTDLTQYEIFSQIFMAENAENGF
IMIGDPKQSIYKFRGADIFTYLRAAKQADEQFTLGKNWRSLPEVVQAVNNLFSFANDNSP
FLYEDIGFHPVEADSQKGQLVSEQGHFVGYITENSKLDDLAEMCAYQIHQQLEAMAQGKF
GVEKNGEFQSFAAKDIAILVRKGSQAKRIKKALAKRNIKSVYLAESASVFGSEIATELCW
LLQAALNPYHYKALLSALGSTLWGLTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVL
PMLHKIYLEQGIIERLKGLENADRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSP
DFNDEQQLRLESEEELIKIVTIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGAL
DWCLGSEEASFSLQYEAYAEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIP
TGKVPVSDYFSQKRIAANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTS
LYAQHERFSEGKSERVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFF
EHCQFNEQIDREAVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLN
EWQFYLRLKNDKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLI
DYKSNFLGYLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGV
AYLFLRAMNGENDNGVYFDKPTKQLIEEMDRLFG
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgaaaaacctaaatcctatccaactacctttgaataaatccgttttaatcgaagcgtcg
gcaggtacagggaaaacctttaccattgccaacctgtatttgcgtttattgctcggcatt
ggttgcaacccgttaacggtggaacaaattttggtggtgacatttaccaaagcagcaacc
gaagagttgaaaaaccgtatccgtaaaaatattcagcaatgtgccgactttttaaaagat
caagctgatggtttggaagtggaaagtacaaaatcctatcgaaacaaccttgattttttg
gcacagatttatccgctcattccgaatattcacgaagcattgttacgtttaagtattgcc
gaacgggaaattgataccgccagcgtgtttaccattcacggcttttgtcaaaaaatgctg
gttcagtttgcgtttgagtcgggcgtgcggtttgacttggatttacagccaaaccaaagt
gatctacttaaaaaattaagtgaagaagtctggcgagagcaattctatccgcaagattta
gccatcacttatgcggttgccgaacaacttggtacgccggaatatgccctcaatgcggta
aggcgttatttatctactgaattacctgaaccaaatgcctctttaaatcaagatattgcc
gagcatttggctcaatatcagcagtttattaatgaggtgaaatcctattggaaaacgcat
tcagatgaactggttgaaactatccgccacgatttaaagcataaaattacgctgcacgga
ggttggtatcgagcgaccacttttgaagccggtgtggaagtgatgaaccagtgggctaat
tcgcaacataaccatttcccggcagggctttatttattcactacagagaaaattgcggct
ggcacgaaaaagagctgtgagccgatagattcccctcatcttgcaaaaaatcaggctttt
ttgaccgcttacaaggaacgttttgaaaacagcttgtcagcaatgttgcagtatcaattt
ttaattgctctcaaagcaaaattggcagagtacaaacaatcgcacccacaacgcagtttt
gatgatttactcacaatgctaaaccaagcgttgaaaaatctacacacgggcgaagccttg
tctcagaaaattcgggcgatgtatccttttgcgatgatcgatgagttccaagataccgat
ttaacccaatatgaaattttcagccaaatttttatggcagagaatgcagagaacggcttt
attatgattggcgacccgaaacagtcgatctataaattccgtggggcggatattttcacg
tatttgcgagcagcaaagcaggctgatgaacaattcacattgggcaaaaactggcgttcg
ttgcctgaagtggtgcaagcggtcaataatttgttttcttttgcaaatgataactctccg
tttctttatgaggatattggctttcacccagtggaggctgatagccaaaaaggtcagtta
gttagtgagcaagggcattttgtaggctacatcacggaaaacagtaaattagatgatttg
gctgaaatgtgtgcttatcaaattcatcaacagcttgaggcgatggctcaaggcaaattc
ggagttgaaaaaaacggcgaatttcaatcctttgctgcaaaagatattgcgattttagtc
cgaaaaggttcacaagctaagcgaatcaaaaaggcgttggcaaaacgtaatatcaaatcc
gtctatttagctgaatcagcttctgtatttggttcggaaattgcaacagaattgtgttgg
ttattgcaagccgcactgaatccgtatcattacaaggcattattatcggcgttaggctca
accttgtggggcttaacggcggcagagatccaccgctataaggaaaatgagcaactttgg
gatctgaaagtcaatcagtttgtggaatacagcaacatttggaaagagcagggcgttctg
ccgatgttgcataaaatctacttggagcagggcattatcgaacgtttgaaaggtttggaa
aatgcggatcgcttgattacggatttattgcatttaaccgaaattttgcaggaaacctcg
caagcgttagagtctgaagctgaactgttgcggtggtatgaaaagcaagttaattcgccc
gattttaatgacgagcaacaacttcggttggaaagtgaagaggagctaatcaaaattgtg
acgattcacggctcgaaaggcttgcaatatccaattgtttggttaccttttgtttcacaa
aaaagtgagggagacacgcagacagcattaagtttatatcgcaattctcaaggtgcgctg
gattggtgtttaggctcagaagaggcaagtttttcgctacagtatgaggcttatgcggaa
gatttacgtttgctgtatgtggcattaacccgcgcggaatctcagcttaacttagtgttg
ccgaaagagatttccggctggtctccactccattacttgttagcagacggggaaatacct
acaggaaaagtgcctgtttcagattattttagccaaaaacggattgctgctaatttggtt
gaagtagccggggaattacctttctcactgtgggaaggagaacaatcttcagacgattac
caagcaaaaacctttagtggcaatatccgtgtggttggtcaaattaccagctttacttca
ctttatgcccaacacgagcgttttagtgaagggaaatcagaaagggtaatggatttagcc
caagatcgagatgtacatatagaaaccattgaggcaggttattcaagtgaaactgccgct
ttctcgccattccaattcccacacggtattaaagtgggcacggtgttacatcactttttt
gagcattgccaatttaacgaacaaattgatagagaggctgttgctaaagtatgcgagcaa
ttagggctaagcgaggaatggattgaaccaacagcattatggtttgagcgtattctaact
acccctttggcagaggcaaatttctgcttaaaagcgattgatgaaaccaaacgattaaac
gagtggcaattctatttacgcttaaaaaatgataaagccttacatcaattaaatgcgtta
ttaaagcaacatagccctttagcaaaaactttacctgaattgcaattaccgcaattagaa
ggttttgtgcgaggctttgtagattgtatcgtgcaagtggaggagaaattctacttaatt
gattacaaatcgaatttcttaggctatctgccacaaaattatgcgaaagaacacattcaa
cgggaaatgggcagacaacgctatgatttgcaatatctgctttacactctcgccttacac
cgttatctaactgcccgtttaggtgaaaaatacgattatgaacgagacttcggcggagtg
gcttacttgttcttaagggcaatgaacggcgaaaatgataacggcgtttattttgacaag
ccgactaagcagttgattgaagaaatggatcggttgtttgggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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