KEGG T01301: MHR

Mesomycoplasma hyorhinis HUB-1: MHR_0640

Entry

MHR_0640          CDS       T01301

Symbol

fpg

Name

(GenBank) Formamidopyrimidine-DNA glycosylase, MutM

K10563

formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]

Organism

mhr Mesomycoplasma hyorhinis HUB-1

Pathway

mhr03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:mhr00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MHR_0640 (fpg)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhr03400]
    MHR_0640 (fpg)
Enzymes [BR:mhr01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MHR_0640 (fpg)
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MHR_0640 (fpg)
DNA repair and recombination proteins [BR:mhr03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     MHR_0640 (fpg)

SSDB

Motif

Pfam:

Fapy_DNA_glyco H2TH zf-FPG_IleRS DUF5816 Zn_Tnp_IS1595 zf-RING_6 SAMD1_WH

Other DBs

NCBI-ProteinID:

ADM22090

Position

complement(786884..787720)

AA seq 278 aa
MPELPEVVTVVNQLNEKIINKKVVSVKLYKEKLLKNSTIEQLENWFVNEKILSVKNKGKF
IVFYFSNDKILISHLRMNGKYFFNNSSKKELHNHLMIQFDDNTFLHYNDTRMFGTFHIKT
TKDYLNTTPLSNVGPTPMEISEEELFNKLQKSKRSIKPTLLDQQIVSGLGNIYVDEVLFA
CSIHPLTKAFLINKNELKLIKKFATSILLKSIELGGSTINSYSSLNMQEGNFQNFLQVHT
KKGFACSRCNNIIEKITVGGRGTYICSNCQNEKKQSKL

NT seq 837 nt +upstreamnt +downstreamnt
atgccagaattaccagaggttgttacagttgttaatcaactaaatgaaaaaattatcaat
aaaaaagtagtttctgtcaaactttataaagaaaaattactaaaaaattccacaattgag
caattagaaaactgatttgtaaatgagaaaattttaagtgtaaaaaacaaaggaaaattc
attgttttttattttagtaatgacaaaattctaatttcccatttaaggatgaatgggaaa
tatttttttaataactcatctaaaaaagaactacacaatcatttgatgattcaatttgat
gataatacttttttacattacaatgacacaaggatgtttggtacttttcatattaaaaca
acaaaagattatttaaacacaactcctttatctaatgttggaccaactccaatggaaatt
agtgaagaagaattatttaataaattacaaaaaagcaaaagatctattaaaccaacttta
ctagatcaacaaattgtttctggtttgggaaatatttatgttgatgaagttctttttgct
tgttcaattcatcccctaactaaagcgtttttgataaacaaaaatgaattaaaattaatt
aaaaaattcgccacttcaatattattaaaatcaatagaactaggtggttcgacaattaat
tcatattcctccttaaatatgcaagagggtaattttcaaaattttttacaagttcatact
aaaaaaggttttgcttgttcaagatgtaataatataatagagaaaattacagtaggagga
agaggaacatatatttgttccaattgtcaaaatgaaaaaaaacaaagtaaactataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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