KEGG   Mesomycoplasma hyorhinis HUB-1: MHR_0645
Entry
MHR_0645          CDS       T01301                                 
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mhr  Mesomycoplasma hyorhinis HUB-1
Pathway
mhr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MHR_0645 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhr03400]
    MHR_0645 (uvrB)
DNA repair and recombination proteins [BR:mhr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MHR_0645 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MHR_0645 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA Kinesin Helicase_C_2 AAA_30 AAA_22 AAA_7 SWI2_SNF2 Microtub_bd DUF87 AAA_16
Other DBs
NCBI-ProteinID: ADM22095
Position
complement(792323..794329)
AA seq 668 aa
MLFHLQSKKKDFYQKMFKLVSNFQPTGDQPKAIKALVDGIKNHKDHQVLLGVTGSGKTFT
MANVIAQLNRPVLILSHTKTLASQLYTEFKEFFPENRVEYFVSYFDFYRPEAYLPAKDVY
IDKTSQTNWDLEAMRMSALNALTLRRDTIVVSSVAAIYGSYNPKEYKQHFLNLELNQELK
PSDFAIELVKIQYSRNQVDTVPGSFSAKGDVFIISPAWTDKYLIKIEFFGNIIEKISKIH
PVDKKIIQTFTSYTIFPASAYTLSPNTIQTAIKTILTELDFQLNYFEKEGKLLEKQRLNE
RVLNDVDSLNNFGFCKGIENYARHIDQREAGEQPYSLLDYLPEDALIFIDESHEMITQLN
RMYKGDRSRKLSLVNYGFRLPSALDNRPLKFEEFEKFKQPKIYVSATPSNYEIDKADGEV
IHQLIRPTGLLDPVIEVRPTHSQIDEIYDLLQEQKSKNERTIILTTSKRSAEELSRYLES
KKQKVYYIHSTFTTFERDDILIKLRKGIYDAIIGINLLREGIDLPEVSLVIVLNADEESF
FRSKTSLTQFVGRAARSNHGKAIFFADKISKSMAATIADNQRNRAIQHQYNLDNNITPKP
VIKPIIQQIREKDQNKIISLIHNKNKETKAEKDKLIASLRKQMKDAAREENYELAIELQQ
VIAELEHS
NT seq 2007 nt   +upstreamnt  +downstreamnt
gtgttgtttcatttacaaagcaaaaagaaggatttttatcaaaaaatgtttaaattagtt
tcaaattttcaaccaacaggagatcaaccaaaagcaattaaagctttagtggatggaata
aaaaatcacaaagatcatcaagttcttttaggtgttacaggttcagggaaaacattcaca
atggccaatgtaattgcacaattaaatcgccctgttttaatactttctcatactaaaact
ttagcttcacagttatatacagagtttaaagagtttttccctgagaatagagttgaatat
tttgtttcatattttgatttttatcgtccagaagcatatttgccagcaaaagatgtttac
atagacaaaacaagccaaacaaactgagatttagaggcaatgcgtatgtcagctcttaat
gcgcttactttaagaagagatacaattgttgtttcttctgtagctgctatttatggttct
tataatcctaaagaatataaacaacattttcttaatttagaactaaatcaagaactaaaa
ccttctgattttgcaattgaattagttaaaattcaatattcaagaaaccaagttgataca
gttcctggttcttttagtgctaaaggtgatgtttttattattagtcctgcttgaactgat
aagtacttaataaaaatcgaattttttggaaatattatcgaaaaaatttctaaaatccat
ccagtggataaaaaaataattcagacttttacaagctatacaatttttccagcttcagct
tatactttatcacctaatacaattcaaactgcaataaaaactattttaacagaattagat
tttcaactaaattactttgaaaaagaaggaaagttattagaaaaacaacgtttgaatgaa
agagttttgaatgatgttgattcactaaataattttggtttttgcaagggaattgaaaac
tatgcaagacacatagaccaaagagaagcaggagaacaaccttatagtttattagactat
ttgcctgaagatgcacttatttttatagatgaatctcatgaaatgattacacaattaaat
agaatgtataaaggtgatagatctagaaaactcagtttagtaaattatggttttagatta
ccttctgcactagataatcgacctttaaaatttgaagaatttgaaaaatttaaacaacca
aaaatttatgtttcagcaacaccttcaaattatgaaattgataaagcagatggcgaagta
attcatcaattaattagacctacaggacttttagatccagttattgaagttcgtccaaca
cattcacaaattgatgaaatttacgatcttttacaagaacaaaaaagtaaaaatgaaaga
actataattctaacaacaagcaaaagatcagctgaagaattaagtagatatctagaaagt
aaaaaacaaaaagtttattatattcattcaacatttacaacatttgaaagagatgatatt
ttaattaaattaagaaaaggtatttatgatgcaatcatagggattaatcttcttagagaa
ggaattgatctaccagaagtttctttagttatagttttaaatgctgatgaagagtctttt
tttagatctaaaacttcattgactcaatttgttggtagagcagctagaagtaatcatgga
aaggctattttctttgcagacaaaataagtaaaagcatggcagccacaattgctgataat
caaagaaacagagcaattcaacaccaatataatctagataataacataaccccaaagcct
gttatcaaaccaataattcaacaaattagagaaaaagatcaaaacaaaattatttcttta
attcataataaaaacaaagaaactaaagcagaaaaagacaaattaattgcttcattgaga
aaacaaatgaaagacgctgctagagaagaaaattatgaattagcaatagaacttcaacaa
gtaatcgctgaattagaacattcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (23)   

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