KEGG   Mannheimia haemolytica M42548: MHH_c02400
Entry
MHH_c02400        CDS       T02635                                 
Symbol
hfq
Name
(GenBank) HF-I, host factor for RNA phage Q beta replication Hfq
  KO
K03666  host factor-I protein
Organism
mhx  Mannheimia haemolytica M42548
Pathway
mhx02024  Quorum sensing
mhx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mhx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MHH_c02400 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MHH_c02400 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mhx03019]
    MHH_c02400 (hfq)
   03036 Chromosome and associated proteins [BR:mhx03036]
    MHH_c02400 (hfq)
Messenger RNA biogenesis [BR:mhx03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     MHH_c02400 (hfq)
Chromosome and associated proteins [BR:mhx03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    MHH_c02400 (hfq)
SSDB
Motif
Pfam: Hfq LSM Gag_p24_C
Other DBs
NCBI-ProteinID: AGK00743
Position
215743..216015
AA seq 90 aa
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARALSHNNNNQAQHAQPAAEVTEQAE
NT seq 273 nt   +upstreamnt  +downstreamnt
atggcaaaaggtcaatctttacaagatccatatttgaatgcacttcgtcgtgagcgtatt
cctgtttcaatttatttagttaacggcattaaattacaaggtcagatcgagtcgttcgac
caatttgtgattttattaaaaaacactgtaagccaaatggtgtataaacacgctatttca
acggttgttcctgcccgtgcgttatcgcataacaataacaaccaagcccaacacgctcag
cctgctgccgaagtaactgaacaagcggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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