KEGG   Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16: UY43_C0001G0903
Entry
UY43_C0001G0903   CDS       T04022                                 
Name
(GenBank) putative single-strand DNA-specific exonuclease, single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mib  Candidatus Beckwithbacteria bacterium GW2011_GWC1_49_16
Pathway
mib03410  Base excision repair
mib03430  Mismatch repair
mib03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UY43_C0001G0903
   03430 Mismatch repair
    UY43_C0001G0903
   03440 Homologous recombination
    UY43_C0001G0903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mib03400]
    UY43_C0001G0903
DNA repair and recombination proteins [BR:mib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     UY43_C0001G0903
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UY43_C0001G0903
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UY43_C0001G0903
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 MerR_1
Other DBs
NCBI-ProteinID: AKM79618
Position
complement(822503..824185)
AA seq 560 aa
MTKVWHVNQKVSGKSSKIRRQQIIAALLKNRRLLTKPAQKEFFQPPHPQDLDLKTIGISE
SQVKKALTRLKQALTQKQLIYIYGDYDADGITATAILWETLDRLGAKVLPFIPLRGDATR
GLSVAGITTILKKDKPALIITVDNGIVSFKGARFAKKEGIDLIISDHHVPQKKLPPATAV
IHTTLTSGAGVAWFFAREIVKHFLHSGSVTTLELAALGTIADMVPLLSVNRSLAFHGLND
LRQTSRPGLVTLARDAGVNLKTLDDYQVSFLLSPRLNAMGRLHQALDSLRLLCTRDKARA
KKLSRDLNSANLNRQDLTRKTFFHALDQAKAQKNQNLIFVSDPSYHDGIVGLVASQLVRS
FHRPAVVVAVGESQSKGSARSIKGFNLIKNFQSLSSLFLEVGGHKLAAGFTAETKNLPQI
KTRLQKVAAESLTPEQLKPVLEVDCEINLTDVGWQLYREISRFAPFGFDNPMPVFVTRGV
KLDRLRQVGKEGKHLQLILSTKHEARNSKLGGIAFGFGQLSASLSPGATVDLAYAIDENV
WNNQKSLQLKVKDIIILPRH
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgaccaaggtgtggcacgtcaaccaaaaagtttccggaaaaagcagtaaaatccgccgc
caacagatcatcgccgctctgttaaaaaatcgccgcctgctgacaaaaccggcccaaaaa
gaatttttccagccccctcatccccaagacttggatttaaaaacaatcggcatcagtgag
tcacaagtcaaaaaagctttaacccgcctcaaacaggccttaacccaaaaacaattaatc
tacatctacggcgactacgacgccgacggcatcaccgccaccgccattctctgggaaact
ttagaccgcttaggcgccaaagtcctgcccttcattcccttaaggggcgacgccacccgc
ggcctgtcagtcgccggcatcaccactattttaaaaaaagataaacccgccttaatcatc
accgtcgacaacggcatcgtctctttcaaaggcgcccggtttgccaaaaaagaggggatc
gacctaatcatctccgaccaccacgtcccccaaaaaaaacttccccccgccaccgccgtc
atccacaccactttgacctccggtgccggcgtcgcctggtttttcgcccgcgaaatagtg
aaacatttcctccactccgggagtgttaccaccctcgagctcgccgctctcggcaccatc
gccgacatggttccgcttttgtcggtcaaccgctctttggccttccacggcttaaacgat
cttcgccaaacctcccgccccggccttgtgactctggcccgggacgccggcgtcaatctt
aaaaccctggatgattaccaagtcagctttttactttcccccaggttaaacgccatgggc
cgcctccaccaggccctcgattccctgcgcttactctgcacccgcgataaagcccgggcc
aaaaagctctcccgcgacttaaactcggccaatcttaaccgccaggatttaaccagaaaa
actttttttcatgccctggaccaggccaaagcgcaaaaaaaccaaaacctcatcttcgtc
tccgaccccagctaccacgacggcatcgtcggcttggtggcgagccaattggtcagaagc
ttccaccgcccggccgtggtcgtcgccgtcggtgaatctcaatccaaaggttcagcccgt
tccatcaagggtttcaacttaatcaaaaacttccaaagcctaagcagtctgtttttggaa
gtcggcggccataaacttgccgccggctttaccgccgaaaccaaaaacctgccccaaatc
aaaacccggctgcaaaaagtcgctgccgagagtttaacgccggagcaattaaaaccggtt
ttggaagtcgattgcgagattaatttaaccgacgtcggctggcagctttatcgggagata
agccgttttgccccatttggttttgacaaccccatgcccgtctttgtcaccaggggagtg
aaacttgatcgcctgcgccaggtgggtaaggaaggcaaacatctccaactaattttaagc
acgaagcacgaagcacgaaactcgaaactagggggtatcgcctttggctttggtcagtta
tcagccagcctttctcccggagccacggtcgaccttgcctacgccatcgatgaaaatgtc
tggaataatcaaaaatcgctgcagcttaaagtcaaggatattataattttaccccgtcat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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