KEGG   Allocoleopsis franciscana: Mic7113_6436
Entry
Mic7113_6436      CDS       T02374                                 
Name
(GenBank) DNA polymerase III, subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
mic  Allocoleopsis franciscana
Pathway
mic03030  DNA replication
mic03430  Mismatch repair
mic03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mic7113_6436
   03430 Mismatch repair
    Mic7113_6436
   03440 Homologous recombination
    Mic7113_6436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mic03032]
    Mic7113_6436
   03400 DNA repair and recombination proteins [BR:mic03400]
    Mic7113_6436
Enzymes [BR:mic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Mic7113_6436
DNA replication proteins [BR:mic03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Mic7113_6436
DNA repair and recombination proteins [BR:mic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Mic7113_6436
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_22 AAA_30 RuvB_N AAA_19 TIP49 AAA_16 DNA_pol3_delta AAA_5 Herpes_Helicase DUF815 AAA_14 Rad17 AAA_18 AAA_28 AAA_6 AAA_2 RNA_helicase
Other DBs
NCBI-ProteinID: AFZ22016
UniProt: K9WQD6
Position
pMIC7113.01:53061..54620
AA seq 519 aa
MSYQPLHQKYRPQTFAQLVGQDAIATTLTNAIRLQRIAPAYLFTGPRGTGKTSSARILAK
SLNCLSTDQPTVNPCGECEVCRAIASSSSLDVIEIDAASNTGVDNIRTLIESAQFTPMMC
RYKVFLIDEAHMLSTQALNALLKTLEEPPSRVVFILATTNAERLLPTIISRTQRFDFRRI
PLNAMVQHLKAIAELESIDITPQALNLVAQIASGGLRDAQSLLDQLSLLPKQITPETVWE
LVGAVSESDSIALIEALTLKDFTALLCVTRRLVDAGIEPLTILQTLTSSCRELLIALTSP
TRLDLVTVSPQSWEKLCELAQHWDITALQHTLQQLQVGSRQLTNTQVPVLWLEAVLLSVS
PQTSTTPATTTTPLIADTLTRGHSDAGNGEKLSASPTLRVTASFSSLPRRKSPTTSTSKN
GTGTQPTLTVFQEPEQELTSSVSVTWEKVWQTSLSYLSPLNKSLLSNHGSLLDVEGSVAR
VGIKSASLAKIATNSRADIESALSKALGKPIEVNIEVSH
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtcatatcaacctctgcatcaaaaataccgtcctcaaacctttgcacagctcgtcggt
caagacgcgatcgctactaccctaaccaacgccatacgactgcaaagaattgctccagct
tacctgtttacaggacccagagggacgggcaaaacctccagcgctcgcattcttgccaaa
tccctcaactgcctctccactgaccaacccactgtaaatccttgtggagagtgtgaagtg
tgtcgggcgatcgcgtctagttcttccttagatgtaatcgaaatcgacgcggctagcaac
actggggtagataatatccgcacactcattgaaagtgctcagttcactcctatgatgtgc
cgctacaaggtcttcttaattgatgaagcgcatatgctctcaactcaggcactaaatgcc
ttactcaagactctagaggaacccccctcacgagttgtctttatccttgctaccaccaat
gcagagcggttattgcccacaattatcagtcgcacgcaacgctttgacttccgccgcatc
cctctaaacgcgatggtacagcacttgaaggcgatcgcagaacttgagagcatcgatatt
actccacaagccttgaacctagtggctcaaatcgctagcgggggattgcgggatgctcag
agtctgttagaccagttgagtcttttacccaaacagataactccagagacggtgtgggag
ttagtgggagcggtgagcgagagtgactccattgccctgatagaagcgcttacactgaag
gacttcacagccttgctttgtgtgactcgacgattggtagatgctggaattgagccactg
accattctgcaaaccctaacaagtagttgtcgagagctactaattgctttaacgagtccg
actcgacttgacctggtaacggtcagcccccagagttgggagaaactgtgtgagttagcc
caacactgggacatcaccgccttacaacacactctacagcaactccaagtcggttcgcgg
cagctcactaacacacaagttcctgtactttggttagaagccgttctactttcggtgtcc
cctcagacatcgacgacacctgctacaaccaccacgccccttattgctgacactctgaca
cggggacactctgacgctgggaatggagaaaaactctccgcgtctcccactctccgcgtc
accgcgtctttttcctcccttccacgacggaaaagcccaacaacaagcacgtcaaaaaat
ggtaccggtactcagcccactttgacagtatttcaagagcctgagcaggaactcactagc
agtgtcagtgttacttgggaaaaagtatggcaaacttccctaagctatctctctcctctc
aacaaatccttgctctcaaatcacggctctttactcgacgtagaggggtctgtggctcgt
gttggtatcaaatctgccagcctcgctaaaatcgccactaatagccgcgctgatatcgag
agtgctttgagcaaggcactaggaaagccgattgaggtgaacatcgaagtgagtcattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (20)   
   Pfam (20)   
All databases (42)   

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