KEGG   Micromonas commoda: MICPUN_107404
Entry
MICPUN_107404     CDS       T02695                                 
Symbol
CBF5
Name
(RefSeq) predicted protein
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
mis  Micromonas commoda
Pathway
mis03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MICPUN_107404 (CBF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mis03009]
    MICPUN_107404 (CBF5)
   03032 DNA replication proteins [BR:mis03032]
    MICPUN_107404 (CBF5)
Ribosome biogenesis [BR:mis03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    MICPUN_107404 (CBF5)
 Prokaryotic type
    MICPUN_107404 (CBF5)
DNA replication proteins [BR:mis03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     MICPUN_107404 (CBF5)
SSDB
Motif
Pfam: DKCLD PUA TruB_C_2 TruB_N UPF0113
Other DBs
NCBI-GeneID: 8246397
NCBI-ProteinID: XP_002504230
JGI: MicpuN3_107404
UniProt: C1EBW6
Position
9:join(375444..375479,375616..375711,375791..377092)
AA seq 477 aa
MGKDKKDVGSKQVTEDFAIAPEKITPTLDASKWPLLLKNYDKLMREFARVSHPPPSDRRP
VAAPRSPQVRTGHYTPIPCGHSPLKRPLQEYIRYGVINLDKPANPSSHEVVAWLKRMLRV
EKTGHSGTLDPKVTGGLIVCIDRATRLVKAQQGAGKEYVCICRLHGAPEGGKTAVQRAIE
TLTGALFQRPPLISAVKRQLRIRTIYESKMYEYDEERNLVVFWISCEAGTYVRTMCVHLG
LLLGVGGHMQELRRVRSGILGEKDNLVTMHDVMDAMWVHDNLKQEDYLRRVVMPLEVLLT
NYKRVVVKDSAVNAICYGAKLMIPGLLRYEAGIEVGEEVVLMTTKGEAIAVGIAQMNTAV
MATCDHGCVAKIKRVVMERDTYPRRWGLGPTAQAKKKLIAEGKLDKFGKPNDKTPAEYLR
AVPDANGAKAKDAGERDKRERSPGADVSGDSPEKKKDKKEKKEKKEKKEKKEKKDKS
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgggcaaggacaagaaagatgttgggtccaagcaggtcaccgaggatttcgccatcgcc
ccggagaagatcaccccgaccctggacgcctccaagtggccgctcctgttgaagaactac
gacaagctcatgcgagaatttgcgagggtttcccatcctccgccctctgaccgccgaccc
gtcgccgcaccccgatcaccgcaggttcgcaccgggcactacaccccgatcccatgcggc
cactccccgctgaagcgcccgctccaggagtacatccgctacggcgtgatcaacctcgac
aagcccgccaacccctcgtcgcacgaggttgtcgcgtggctcaagcgtatgctccgcgtg
gagaagacggggcactccggcacgctcgacccgaaggtgacgggcggtttgatcgtctgc
atcgaccgcgcgacgcgcttggtcaaggcccagcagggcgccggtaaggagtacgtgtgc
atctgcaggctgcacggagcgccggaagggggcaaaaccgcggtgcaacgcgccatcgag
acgctcaccggcgcgctgttccaacggccgccgctcatctccgcggtcaagcgacagctc
cgcatccgcaccatctacgagagcaagatgtacgagtacgacgaggagcgcaacctcgtg
gtgttctggatctcctgcgaggctgggacgtacgtgcgaaccatgtgcgtgcacctcggt
ttgctcctgggcgtgggcgggcacatgcaggagctccgccgcgtccgctccggcatcctc
ggcgagaaggacaacctcgtgacgatgcacgacgtcatggacgccatgtgggtccacgat
aacctcaagcaggaggactaccttcgccgcgtcgtcatgccgctcgaggttctcctcacc
aactacaagagggtcgtggtcaaggactccgccgtcaacgccatctgctacggcgcgaag
ctgatgatcccgggcctcttgcgatacgaggcgggcatcgaggtcggcgaggaggtggtc
ctgatgaccacgaagggcgaggcgatcgccgtgggcatcgcacagatgaacacggcggtg
atggccacgtgcgaccacgggtgcgtggcgaagatcaagcgcgtcgtgatggaacgcgat
acctacccgaggcgctggggcttgggtcccaccgcgcaggcgaagaagaagctcatcgcg
gagggcaagctggacaagttcggtaagcccaacgataagacgcccgcggagtacctccgc
gcggtgcccgacgccaacggggccaaggcgaaggatgcgggtgagcgggacaagcgcgag
cgatcgccgggcgccgacgtatccggcgactcgccggagaagaagaaggacaagaaggag
aagaaggagaagaaggagaagaaggagaagaaggagaagaaggacaagtcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (93)   
   KEGG ORTHOLOGY (1)   
   RefGene (87)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (106)   

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