KEGG   Micromonas commoda: MICPUN_78848
Entry
MICPUN_78848      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K15449  tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
Organism
mis  Micromonas commoda
Brite
KEGG Orthology (KO) [BR:mis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mis03016]
    MICPUN_78848
Enzymes [BR:mis01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.44  tRNA 4-demethylwyosine synthase (AdoMet-dependent)
     MICPUN_78848
Transfer RNA biogenesis [BR:mis03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    MICPUN_78848
SSDB
Motif
Pfam: Flavodoxin_1 Wyosine_form Radical_SAM
Other DBs
NCBI-GeneID: 8241152
NCBI-ProteinID: XP_002499475
JGI: MicpuN3_78848
UniProt: C1E003
Position
2:join(437359..438078,438154..438936,439216..439827)
AA seq 704 aa
MSSVLPKLRALRDSLRTKLGLHGGPSTATVAVEPTRKPPDACGGAESCCRADDDAGAESC
CRADDNRDDAGCVAPTVTGGRILFGSQTGTARRLAHKLANSLRTRHRVDLQVTDLADYDP
EDLVKEKVALVVLSTYESADGAAPPDAARWFCKWASESSRDERFGMLYLMRVKFAVFGCG
NREYGAERFNAAARSLDADLARLGGERVLRRCDGDESSGKMEEQFHDWVDKLAERLNPEG
AFAAKTNLAPAVDADVDKKETFYDTDDEEGSGDDDYEGASAGSEDGMDMEDMGGDATGEK
REMVTPQLRAALTKQGYKILGSHSGVKLCRWTKAQLRGRGGCYKHSFYGIESHRCMEATP
SLACANKCVFCWRHHTNPVGREWRWQMDDAETIVEKAVSEHRGMIKQMKGVPGVIPERFE
EGMDPRHCALSLVGEPIMYPEIDKFVGLLHAKRISTFLVTNAQFPDAIKNLPAITQLYVS
VDAATPETLKAIDRPLFGDYWDRFVSSLTALRDKNQRTVYRLTLVKGMNAEDAAEYAKLI
DLGKPDFIEIKGMTYCGTTSGASNLTMENVPYHEEVKKFGEDLCMARLKQQGGDTGGELT
GGTPKEAEYGLACEHAHSCCILLGRKDPYLVDGAWHTWIDYEKFQDLAASGEQFRSEDYM
LPTPHWSVWGAEEGGFDPGETRVRKVRNHPGKDSAQSSPRPTGD
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgtcgagcgtcctcccgaagctccgggccctacgggactcgcttcggacgaagctgggt
ctccacgggggcccgtccaccgccaccgtcgcggtcgagccaacgcggaaacctcccgac
gcttgtggcggcgccgagagctgctgtcgcgccgacgacgatgcgggcgccgagagctgc
tgtcgcgccgacgacaaccgcgacgatgccggatgcgtggcgccgaccgtgaccgggggc
aggatcctgttcggatcgcagacgggcaccgcgcgcaggctggcgcacaagctcgccaac
tccctccgcaccaggcaccgcgtcgacctgcaagtcacggacctcgccgactacgacccc
gaggacctggtcaaggagaaggtggcgctcgtggtgctcagcacgtacgagtccgccgac
ggcgcggcgccgcccgacgccgcgcgctggttctgcaagtgggcgtccgagagctcgagg
gatgagcgcttcgggatgctgtacctgatgagggtcaagttcgcggtgttcgggtgcggc
aacagggagtacggcgccgagaggttcaacgcggcggccaggtcgctcgacgccgatctg
gcccggctcggaggcgagcgagtgctccgccggtgcgacggcgacgagagctcggggaag
atggaggaacagttccacgactgggtggacaagctcgcggagcgcctcaaccccgagggc
gcgtttgcagccaagacgaacctcgcgcctgccgtcgacgcggacgtcgacaagaaggag
actttttacgacacggacgacgaggagggatcgggcgacgacgactacgagggcgcgagc
gccgggtccgaggacggcatggacatggaggacatgggcggcgacgcgaccggcgagaag
cgcgagatggtgacgccgcagcttcgcgccgcgctcaccaagcagggatacaagattctg
ggttctcactccggggtcaagctgtgcaggtggaccaaggcgcagctccgggggcgcggc
ggctgctacaagcactccttctacggcatagagtcgcaccggtgcatggaggcgacgccg
agtctggcgtgcgcgaacaagtgcgtgttctgctggcggcatcacaccaacccggtgggc
cgcgagtggcggtggcaaatggacgacgcggagacgatcgtggaaaaggccgtgagcgag
caccgcggcatgatcaagcagatgaaaggcgtccccggagtcataccggagcggttcgag
gagggcatggacccgagacactgcgcgctgtccctggtgggcgagccgatcatgtacccg
gagattgacaaattcgtcgggttgctccacgccaagcggatcagcacgttcctggtgacc
aacgcgcagtttcccgacgccatcaagaacctgccagcgatcacgcagctgtacgtttcc
gtggacgccgcgacgccggagacgctgaaggcgatcgacagacccttgtttggggactat
tgggatcgcttcgtcagtagcctcaccgccctccgcgacaagaaccagcgcaccgtatac
cgcctcacgctcgtcaagggcatgaacgccgaggacgccgcagagtacgccaagctcatc
gacctcggcaaacccgactttatcgagatcaagggcatgacctactgcggcaccacctcg
ggagcgtccaacctcaccatggagaacgttccttaccacgaggaggttaagaaatttggc
gaggatctgtgcatggcgaggctgaagcaacagggcggggatacgggcggcgagctcacc
gggggcacgcccaaggaagcggagtatggcctggcgtgcgaacacgcgcacagctgttgc
atcctcctggggagaaaggatccctatttggtcgatggggcgtggcacacgtggatcgac
tacgagaagtttcaggatctggcggccagtggcgagcagttcaggagcgaggattacatg
ctgcccacgccgcattggagcgtatggggcgcggaggaaggaggtttcgatcctggagag
acgcgggtgcggaaggtgaggaaccacccggggaaggactcggcgcagtcatcaccgcgc
ccaactggcgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (117)   
   KEGG ORTHOLOGY (1)   
   RefGene (111)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (128)   

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