KEGG   Methylomonas koyamae: MKLM6_3603
Entry
MKLM6_3603        CDS       T05118                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mko  Methylomonas koyamae
Pathway
mko03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mko00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MKLM6_3603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mko03021]
    MKLM6_3603
   03400 DNA repair and recombination proteins [BR:mko03400]
    MKLM6_3603
Enzymes [BR:mko01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MKLM6_3603
Transcription machinery [BR:mko03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     MKLM6_3603
DNA repair and recombination proteins [BR:mko03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      MKLM6_3603
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD Ribosomal_TL5_C Stk19
Other DBs
NCBI-ProteinID: ATG91790
UniProt: A0A291INK6
Position
complement(4085747..4086754)
AA seq 335 aa
MQSSIGGLLKPRLVEVINESANHSRIVIEPLERGFGHSLGNALRRVMLSSIPGCAVTEIS
IDGVLHEFTTIEGVQEDVIDIILNLKKLAVIVHSRDEVTLTLSKKGAGTVTAGDIELPHN
VEIANPDLVIANVTQDIELNIKIKVERGRGYVPASVRKEMYDDAPVGVLMLDAAFSPIVK
VAYHVESTRVEQRTNLDRLVIELETNGTVDPEHAIKTAASILHDQLSVFVDFEKVNEQVQ
EEVAIEEESFDPVLLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLRTPNLGKKS
LTEIKDILAIKGLSLGMRLENWPPENLADQSQAGI
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgcagagttctattggcggccttctgaagccgagattagtcgaggttataaacgaatcg
gctaaccattcccgtattgtgattgagcctcttgagaggggattcggtcattcgctcggt
aatgctttgagaagagtcatgctctcttctattcctggttgtgcggtcaccgagatttct
atcgacggagtcttgcacgaattcacaacgatagaaggcgttcaagaagatgtcatcgat
attatcttgaatttgaaaaagttggccgtaattgtccattccagggatgaagtcacgttg
actttgtcaaaaaaaggtgccggaacggtaaccgctggcgatatagaattgccacacaac
gttgagatagccaatccagatttggttatcgccaacgtgactcaagatatcgaattaaac
attaaaattaaggtcgagcgcggcagaggttatgttcctgctagcgtgcgtaaagaaatg
tatgacgacgcgcctgtaggtgttttgatgttggacgcagcgttcagtcctatcgtcaaa
gttgcatatcatgtagagagtacccgtgtcgaacagcgtaccaatctggatcgcttggtc
atcgaattggagacaaacggaacggttgatcccgagcacgcaatcaaaactgccgcttcg
atattgcacgatcagttatctgttttcgttgactttgagaaggttaatgagcaggttcag
gaagaagttgcaatcgaagaagaatctttcgatccggttttgttgcggcccgttgatgat
ttggagttgactgttcgttcggcaaattgcttgaaagccgagaacatattttatattggc
gatttgatccaacgcaccgaagtggagttgttacggacgcctaatttgggcaaaaaatcg
ctcacagagattaaagacatcctggccattaaaggactgtcgttaggcatgcggcttgag
aattggccgcctgagaatttggcagaccaatcccaagctggaatttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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