KEGG   Methylomonas koyamae: MKLM6_4281
Entry
MKLM6_4281        CDS       T05118                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
mko  Methylomonas koyamae
Brite
KEGG Orthology (KO) [BR:mko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mko03032]
    MKLM6_4281
   03400 DNA repair and recombination proteins [BR:mko03400]
    MKLM6_4281
Enzymes [BR:mko01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MKLM6_4281
DNA replication proteins [BR:mko03032]
 Prokaryotic type
  DNA Topoisomerases
   MKLM6_4281
DNA repair and recombination proteins [BR:mko03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MKLM6_4281
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 UFD1
Other DBs
NCBI-ProteinID: ATG92446
UniProt: A0A291IQF0
Position
4849599..4852004
AA seq 801 aa
MSEQYDSSNITVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGYCKGVD
VVIHENGSVSVSDDGRGIPVDIHKEEGRSAAEVIMTVLHAGGKFDDNAYKVSGGLHGVGV
SVVNALSEELTLKVRKNGKLHMQKYVLGEPVAPLAVVGDAEGSGTYINFKPSPTIFTNIE
FHYDILAKRLRELSFLNSGVRISLRDERSGKEDVFEFEGGISAFVQHLNKNKTPLFEKVF
HFQAEKEGVTVEVAMQWNDSYQENVFCYTNNIPQRDGGTHLAGFRAALTRTINQYIESNG
LAKKEKVATTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPLVESTMNEKLQEFL
LEQPQVAKAIAGKIIDAARAREAARKAREMTRRKTTLDIAGLPGKLADCQEKDPALSELF
IVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMISSEEVGTLITALGCGIGKD
EYNVEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQLPELVERGHIYIAQPPLYKVKKGK
QEHYVKDDNALNQYLIQMALDKAQLQTDPDTPVIQGPGLEKLATEFADVMNVIQRLSRRY
DDLYLEQMTYMPVLNADIRANPQMLSAWFAQLERNLNAGDHKAVFSSELSYRDAEDFDVT
VNKRLHGITKTFVLHAPFFSGHDYQKIAAYVEHTTNMFGEHSVMRMGEREQHVANFKQAF
EWMMREVKKGQHIQRYKGLGEMNPEQLWETTLDSNSRRLLQVTIQDVIAADEIFTTLMGD
IVEPRRDFIVKNALDVANLDV
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgagtgaacaatacgacagttcgaatatcacagtactgaaaggtctggacgcggtcaga
aaacgtcctggcatgtatatcggtgataccgatgacggttccggtctacatcacatggtg
ttcgaggttgtcgataactcgatagacgaagccttggcgggatattgcaaaggcgtcgat
gtcgtcatccatgaaaacggttcggtgtcggtgtccgacgacggccgcggtatcccggtc
gatattcacaaagaagaaggccgttccgccgcagaagtgatcatgacggtactgcatgcc
ggcggtaaattcgacgacaacgcctacaaagtctccggcggcttacatggcgtcggcgtt
tcggtggtaaatgcactttccgaagaattaaccttgaaagtccgcaagaacggcaaactg
cacatgcagaaatacgtgttgggcgaaccggttgcgccgttggccgttgtcggcgacgct
gaaggcagcggcacctatatcaacttcaagcccagcccgaccatattcactaacatcgaa
ttccattacgacattctcgccaaacgcttgcgcgaattgtccttcctcaactccggcgtc
agaatctcgttgcgcgacgaacgtagcggcaaggaagacgtgttcgaattcgaaggcggc
atcagcgcgttcgtgcaacacctgaataagaacaaaacgccgctgttcgagaaagtgttc
cacttccaggccgagaaggaaggcgtcaccgtcgaagtcgcgatgcagtggaacgattcc
taccaggaaaacgtattctgctataccaacaacatcccgcaacgcgacggcggtactcat
ttggccggctttcgcgccgcactgacccgcaccatcaaccaatacatcgaaagcaacggt
ctggcgaagaaggaaaaagtcgccaccaccggcgacgacgcccgcgaaggcttgaccgcc
gtgttgtcggtaaaagtgccggaccccaaattctcgtcgcaaaccaaagacaaactggtg
tcgtccgaagtgaaaccgttggtcgaatcgacgatgaacgaaaaactgcaggaattcctg
ctggagcaaccgcaagtcgccaaagccatcgccggtaaaatcatcgacgccgctcgcgcc
cgcgaagcagccagaaaagcccgggaaatgacccgccgcaaaaccacgctggacatcgcc
ggcctgcccggcaaactggccgactgccaggaaaaagacccggccttgtccgaactgttc
attgtggaaggggactcggccggcggctccgccaaacaaggccgcgaccgccgtacccaa
gccatcctgccgctgaaaggtaaaattctgaatgtggaaaaagcccgcttcgacaaaatg
atttcgtcggaagaagtcggtaccttgattaccgcgctgggctgtggcatcggcaaggac
gaatacaacgtcgaaaagttgcgctatcaccgcatcatcatcatgaccgacgccgacgtc
gacggctcgcacattcgcaccttgctgctgaccttcttctaccgccaattgccggaactg
gtcgaacgcggccacatctacatcgctcagccgccgttgtacaaagtcaagaaaggcaaa
caagaacactacgtcaaagacgacaacgctttgaaccaatacctgattcaaatggcgctg
gataaagcccaattacagaccgatccggacaccccggtcatccaaggtccgggtttggaa
aaactggcgaccgagtttgccgacgtcatgaacgtaatccaacgcctgtccagacgttac
gacgacctgtatctggaacaaatgacctacatgccggtattgaacgccgatatcagagcc
aacccgcaaatgttgtcggcttggttcgcgcaactggaacgcaacttgaacgccggcgac
cacaaagccgtgttcagtagcgagctgagttaccgcgacgccgaagatttcgacgtcact
gtcaacaaacgcctgcacggcatcaccaaaaccttcgtgttgcacgcaccgttcttctcc
ggccacgattaccaaaaaatcgccgcctacgtcgaacacaccaccaacatgtttggcgaa
cactcggtcatgcgcatgggcgaacgtgagcaacacgtcgccaatttcaaacaagccttc
gaatggatgatgcgagaagtcaaaaaaggccagcacatccagcgctataaaggattgggc
gagatgaatccggaacagctctgggaaaccacgctggacagcaacagccgccgcctgctg
caagtcacgatccaggacgtgattgccgccgacgaaatcttcaccacgctaatgggtgac
atcgtcgaaccccgccgcgacttcatcgtcaagaatgcgctggatgtggcgaatttggat
gtttaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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