KEGG   Mandrillus leucophaeus (drill): 105540405
Entry
105540405         CDS       T08763                                 
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mleu  Mandrillus leucophaeus (drill)
Pathway
mleu03082  ATP-dependent chromatin remodeling
mleu04714  Thermogenesis
mleu05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:mleu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105540405 (SMARCC1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    105540405 (SMARCC1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    105540405 (SMARCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mleu03021]
    105540405 (SMARCC1)
   03036 Chromosome and associated proteins [BR:mleu03036]
    105540405 (SMARCC1)
Transcription machinery [BR:mleu03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     105540405 (SMARCC1)
Chromosome and associated proteins [BR:mleu03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    105540405 (SMARCC1)
   PBAF complex
    105540405 (SMARCC1)
   GBAF(ncBAF) complex
    105540405 (SMARCC1)
SSDB
Motif
Pfam: SWIRM-assoc_3 SWIRM-assoc_1 SWIRM SWIRM-assoc_2 Myb_DNA-binding Myb_DNA-bind_6 Chromo BRCT_2 DUF919 SpeFL
Other DBs
NCBI-GeneID: 105540405
NCBI-ProteinID: XP_011836417
Ensembl: ENSMLEG00000002974
Position
Unknown
AA seq 996 aa
MDFKAGGTLCHILGSAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPN
IYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQDDEEWLRPVMRKDKQV
LVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDE
NRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQA
SLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDSENTPVKGGTVADLD
EQDEETVTAGGKEDEDPAKGDQSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERR
ALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFL
EQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKN
KEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHV
GSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPR
VASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDE
PEKLEGAEEEKMEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEVSEDTK
SEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKY
AELRARQQMEQQQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPP
HPPQPGQIPGPGSMMPGQHMPGRMIPTVGANIHPSGSGPTPPGMPPMPGNILGPRVSLTA
PNGMYPPPPQQQPPPPPPADGVPPPPAPGPPASAAP
NT seq 2991 nt   +upstreamnt  +downstreamnt
atggatttcaaagctggaggcaccttatgtcacattcttgggtctgcttacaagtataaa
aatgaacagggatggcggaggtttgacctacagaacccatcccgaatggatcgtaatgtg
gaaatgtttatgaacattgaaaaaacattggtgcagaacaattgtttgaccagacccaac
atctacctcattccagacattgatctgaagttggctaacaaattgaaagatatcatcaaa
cgacatcagggaacatttacggatgagaagtcaaaagcttcccaccacatttacccatat
tcttcctcacaagatgatgaagaatggttgagaccggtgatgagaaaagacaagcaagtg
ttagtgcattggggcttttacccagacagctatgatacttgggtccatagtaatgatgtt
gatgctgaaattgaagatccaccaattccagaaaagccatggaaggttcatgtgaaatgg
attttggacactgatattttcaatgaatggatgaatgaggaggattatgaggtggatgaa
aataggaagcctgtgagttttcgtcagcggatttcaaccaagaatgaagagccagtcaga
agtccagaaagaagagatagaaaagcatcagctaatgctcgaaagaggaaacattcgcct
tcgcctccgcctccgacaccaacagaatcacggaagaaaagtggcaagaaaggccaagct
agcctttatgggaagcgcagaagtcagaaagaggaagacgagcaagaagatctaaccaag
gatatggaagacccaacacctgtacccaatatagaagaagtagtacttcccaaaaatgtg
aacctaaagaaagatagtgaaaatacacctgttaaaggaggaactgtagcagatctagat
gagcaggatgaagaaacagtcacagcaggaggaaaggaagatgaagatcctgccaaaggt
gatcagagtcgatcagttgaccctggggaagataatgtgacagagcagactaatcacatt
attattcctagttatgcatcatggtttgattataactgtattcatgtgattgaacggcgt
gctcttcctgagttcttcaatggaaaaaacaaatccaagactccagaaatatacttggca
tatcgaaattttatgattgacacgtatcgcctaaacccccaagagtatttaactagcact
gcttgtcggaggaacttgactggagatgtgtgtgctgtgatgagggtccatgccttttta
gagcagtggggactcgttaattaccaagttgacccggaaagtagacccatggcaatggga
cctcctcctactcctcattttaatgtattagctgatactccctctgggcttgtgcctctg
catcttcgatcacctcaggttcctgctgctcaacagatgctaaattttcctgagaaaaac
aaggaaaaaccaattgatttgcagaactttggtctacgtactgacatttactccaagaaa
acattagcaaagagtaaaggtgctagtgctggaagagaatggactgaacaggagaccctt
ctactcctggaggccctggagatgtataaggatgattggaacaaagtgtcggaacatgtt
ggaagtcgtactcaggatgaatgcatcctccactttttgagacttcccattgaggaccca
taccttgagaattcagatgcttcccttgggcctttggcctaccagcctgtcccctttagt
cagtcaggaaatccagtcatgagtactgttgcttttttggcatctgtggtggaccctcgc
gtggcatctgctgcagcaaaagcggctttggaggagttttctcgggtccgggaggaggta
ccgctggaattggttgaagctcatgtcaagaaagtacaagaagcagcacgagcctctggg
aaagtggatcccacctacggcctggagagcagctgcattgcgggcacagggcccgatgag
ccagagaagcttgaaggagctgaagaagaaaaaatggaagccgaccctgatggtcagcag
cctgaaaaggcagaaaacaaagtggaaaatgaaacagatgaaggtgataaagcacaagat
ggagaaaatgaaaaaaatagtgaaaaggaacaggatagtgaagtgagtgaggataccaaa
tcagaagaaaaggagactgaagagaacaaagaactcactgatacgtgtaaagaaagagaa
agcgatactgggaagaagaaagtagaacatgaaatttccgaaggaaatgttgccacagcc
gcagcagctgctcttgcctcagcggctaccaaagccaagcacctggctgcagtggaagaa
agaaagatcaagtccctggtagctctgttggttgagacacaaatgaagaaactagagatc
aaacttcgacattttgaagagctggaaactatcatggacagagagaaagaagctctagaa
caacagaggcagcagttgcttactgaacgccaaaacttccacatggaacagctcaagtat
gctgaattacgagcacgacagcaaatggaacagcagcagcatggccagaaccctcaacag
gcccaccagcactcaggaggacctggcctggccccacttggagcagcagggcaccctggc
atgatgcctcatcaacagccccctccttaccctctgatgcaccaccagatgccaccacct
catccaccccagccaggtcagataccaggcccaggttccatgatgcccgggcagcacatg
ccaggccgcatgattcccactgttggagccaacatccacccctctgggagtggccctacc
cctcctggcatgcctccaatgccaggaaacatcttaggaccccgggtatccctgacagca
cctaacggcatgtatccccctccaccacagcagcagccgccgccaccaccacctgcagat
ggggtccctccgcctcctgctcctggcccaccagcctcagctgctccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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