KEGG   Melampsora larici-populina: MELLADRAFT_50494
Entry
MELLADRAFT_50494  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K12827  splicing factor 3A subunit 3
Organism
mlr  Melampsora larici-populina
Pathway
mlr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MELLADRAFT_50494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mlr03041]
    MELLADRAFT_50494
Spliceosome [BR:mlr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MELLADRAFT_50494
 Complex B
    MELLADRAFT_50494
 Complex C
   U2 SnRNP specific factors
    MELLADRAFT_50494
SSDB
Motif
Pfam: SF3a60_Prp9_C SF3A3 SF3a60_bindingd zf-met zf-C2H2_jaz zf-C2H2_2 AlkA_N CCDC53 DUF6466
Other DBs
NCBI-GeneID: 18928709
NCBI-ProteinID: XP_007416538
JGI: Mellp1_50494
UniProt: F4S5B0
Position
Unknown
AA seq 513 aa
MSFSLLEDVRGTHQDLDRLMSHLTSLLLPGTPKVHRDQLVQAHRASYLSELITERANSLV
EVYADPDGEHSTEIERLSTAGGELTEFYARLGRLNEYHNKYPNRMVEEPEIDWGALGGVD
IEGRDFVDRMFTGEEMLGRYLDLHIHHDAYNNLTPSANKRLAYIAYIDSFDKFDILPRST
KSKNEYDIYLRELREYLVSFHKRIRPMQDLDADLVAVSTEFETKWAAGEIQGWEDPTTTT
AGTSAEASAIWCAACSKHYSKETVYNAHLQSKKHIRAAERLTSSTSFTNITATTSSTNGN
INEIRRAKDHALALLEQEIAMLGTKLTSIRVDTKANVERRAALTDKERQQEIEEQAAREA
AERGEAERAAREGEQGAQGLEEDDDEARIYNPLKLPLGWDGKPIPYWLYKLHGLGVEYKC
EICSDFIYMGRKNFERHFQESRHAFGMRALGLPNTKHFHEITRIEDAFALAEKLKSEGRA
EIFRDETMEELEDDDGNVYNRKTYEDLKRQGLL
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctttctctctgctagaggatgttcggggtactcatcaggacttggaccgacttatg
agtcacctcacctcacttctccttcctggcacaccaaaggtgcatcgcgaccaacttgtt
caagcccatcgagcttcttacctctctgaacttatcaccgaacgcgcgaattcgttggtt
gaagtttatgccgatcctgatggtgaacattcaacagagatcgaacgactctcgacggct
ggaggcgagttgaccgaattctatgctagacttggccgactgaacgaatatcataacaaa
tacccaaatagaatggtggaagagccggagatcgattggggtgcattgggaggggtggat
atagagggtcgtgatttcgttgaccggatgttcactggcgaagaaatgcttgggaggtac
ctcgatctacatatacaccatgacgcgtacaacaacctcaccccctctgccaacaagcga
ctcgcttacatcgcatacattgactcatttgacaaattcgacatcctacctcgctccaca
aagtctaaaaacgaatatgatatatacctgcgggagctgagagaatatttagtctcattc
cataaacgaattcgacctatgcaagatctagatgccgatttagtggctgttagtacagag
ttcgagaccaagtgggctgctggggaaattcaaggttgggaggatcctactacaaccaca
gccggaacttctgcagaagcttccgcaatttggtgtgctgcctgtagtaaacactactcc
aaagagactgtctataatgcccatcttcagtccaagaaacacatccgcgcagccgagcgt
cttaccagctcgacttctttcacgaacattaccgcaactacttccagcacaaacgggaac
atcaatgagatccgacgggccaaagatcatgcactggctttactagagcaagaaatcgcc
atgttaggaaccaaactgactagcattcgtgtggatacaaaggctaatgttgagcgacgg
gctgcgcttacggacaaagaacgacaacaagagattgaggaacaagctgcgcgtgaagct
gcagagcgtggagaggcagagagggcggctagagagggtgaacagggcgcacaaggtctg
gaagaggacgacgatgaggcacgtatctacaaccctttgaagcttccgttaggctgggat
ggaaaaccgatcccatattggctgtataagctgcatgggttgggggttgaatacaagtgc
gaaatttgtagtgactttatctacatgggcaggaaaaactttgagcgacactttcaagag
tcgaggcacgcgttcggaatgcgtgcgctcggtttaccgaatactaaacatttccacgag
atcactcggattgaggatgcatttgcattggctgagaagctcaagtcggaggggcgggct
gaaatctttagagatgagacaatggaagagctagaggatgacgacggaaatgtgtacaat
cgcaagacatatgaggatttgaagcgacaaggattgctttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

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