KEGG   Melampsora larici-populina: MELLADRAFT_59340
Entry
MELLADRAFT_59340  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
mlr  Melampsora larici-populina
Pathway
mlr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MELLADRAFT_59340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mlr03009]
    MELLADRAFT_59340
Ribosome biogenesis [BR:mlr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    MELLADRAFT_59340
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 Nup160 WDR54 RMC1_N WD40_like eIF2A Utp13 Ribosomal_L31
Other DBs
NCBI-GeneID: 18929333
NCBI-ProteinID: XP_007404496
JGI: Mellp1_59340
UniProt: F4R5Y6
Position
Unknown
AA seq 998 aa
MVRSYLRHGGTEVFGLIASNSSNSLFDGKRAYVPALEDVFVWDTKRGERIAMWHATGHTS
PVTAISRSPVDPNLFAVGYQDGSIRLWSGKSHDPLSIFEGHRRAISILAWDRDGGRLASG
AVDGEVVIWDPVAETGLFKLRGHNHRITGLVFVAVPTHIPDPSSSTSLPSPSTHLLTTSQ
DTYLKLWDLQTQHSIESVVAHRTESWSLTVVPHIPSVPLAAADSEESSEPTLDDQLLMTT
GGEGEVKLWILSSLVLLKGPQPSASGDGLQRAIIGAGSLTLSTHAAPGKRVLNAIAQRYS
LRGGISGIVIAFQVGDRDVEVWRIRTVEEIKKKKARRRKREASKSQKASSNVADLTSTDD
TITWLDRIHPWITVRGTSRICSFAFAPTANPLLFRTGEKPNELEVMLALGNNSVEVFTIP
KPVSSSKSGSLQSTLLHSITLPGHRTGIRAVSISFNDQLVASGSNGSLKVWNIQTQKCIR
TMECGYALCVAWLPDNQHILVGTKCGKLMIYELSSSTLIATIEAHTGPIWSLDLRPDSKG
FVTGSGDKSIKFWTFTKKTANPSSSATAFTGELKTVELSATLSKTMKMSDDVLSVRYSPD
SKFLAVATLDSTVKVFFQDTLKFFLSLYGHKLPVLSMDISFDSKLIVTCSADKNVKIWGL
DFGDCHKSIFAHEESVMQVKFESRSHYFWTVGKDKMVKYWDGDKFENIQTLQGHHGEISA
LAVSHDGQLLISGSHDKSIRVWIKTDEPLFLEEEREKELERLYSLEESEKLDISITQSRK
QGEEAGDEEVEAVSKQTTETLMAGERIIEALLLADADLDLTNRFNIAKENMDPEKAEKLA
PPARNPILVAYDNISASAYVLKVIQRIPRAALEDALLVLPFAQVTMMLTHINYWAKKGCS
TSLVCRILSFLIRTHETQITVTASLKLMIDSIKTNMTRSLKKHADMVAYNVEAIRFVKQA
IELEQKEREFVDIDLRPEQEVRKLIKDKHMVKKRKVVL
NT seq 2997 nt   +upstreamnt  +downstreamnt
atggttcgatcttatcttcgtcatggtgggaccgaggtcttcggtttaattgcgtccaac
tcatccaattctttattcgatggcaagcgcgcttatgtaccagccctcgaagatgtgttt
gtctgggataccaaacggggtgaaaggatcgctatgtggcacgcaactggtcacacttct
cccgtcaccgccatttcccggtctcccgtcgaccctaatcttttcgcagtcggctatcag
gacggttcaattaggctttggtcggggaaatcccatgaccccctttccattttcgaagga
caccgtcgcgcaatctccattctcgcatgggaccgtgatggaggcaggcttgctagtggc
gcagtagacggggaagtggtcatttgggatcctgtcgctgaaactgggttgttcaaacta
cgcggacacaatcaccgtatcacgggcctcgtatttgttgcagtccccactcacataccc
gatccttcttcttcaacatcattgccatccccctctactcatcttctcacaacctctcaa
gacacctatctcaagctatgggatcttcagactcaacactccatcgaatctgttgtcgca
catcggaccgagagttggtctctcacagtcgtacctcatataccatctgttcccctggca
gccgcggatagcgaagagtcgagtgaacctaccttggatgaccagctactcatgacaact
gggggagaaggcgaagtaaaactgtggattttgtcttccttggtacttctcaagggcccg
caaccttcagcgagcggagatggtctccaacgagctattatcggcgctgggtctctcact
ttgagcacacatgccgctccgggaaagcgggtactgaacgcgatcgctcagagatattct
ctccgtggtggcataagtggtatcgtgattgcatttcaagtaggggaccgagacgttgaa
gtttggaggatacgtacagtggaagagatcaaaaagaagaaagctaggcgtcgcaaaaga
gaggcatcgaagtctcaaaaagcctcatcaaatgtggctgatttgacaagtacagacgac
accatcacgtggctcgatcgcatccatccttggatcacggtcaggggtactagtcggata
tgttcttttgcatttgcaccgacagccaacccacttttatttcggacgggggaaaaaccc
aacgagcttgaagtaatgttagcgctaggcaacaattctgtagaagttttcacgataccc
aagcccgtatcatcttctaaatccgggtcgctacagtccacattgctacactctatcacc
ttaccgggccaccgaactggaattcgtgctgtttccatctcattcaatgatcaactagtt
gctagcggcagtaatggctctctgaaggtgtggaacattcagactcaaaagtgtatccga
acgatggagtgtggatatgccttgtgcgttgcttggcttcctgacaatcaacatatcttg
gtaggtaccaagtgcggcaaactcatgatctacgaactgagctcatctacactgatcgcc
accatcgaggcacacactggtcccatatggtcacttgacctgaggccggattcgaaggga
ttcgtcaccggaagtggtgataagagtataaaattttggacatttactaagaagacagcc
aatccatcttctagcgcgactgcttttaccggagagcttaaaactgtcgaactatcagct
accttgtccaaaactatgaagatgtctgatgacgtcttgagtgtacgatacagcccggat
tcgaaatttttggcggtggccaccttggatagtacagttaaagtgttcttccaggatacg
ctcaagttcttcttgtccctctacggccacaaactacccgtcctgtcgatggacatatct
tttgactcaaagctgatagtcacttgttcggcggacaaaaatgtcaagatttggggcttg
gactttggagattgtcacaagtctatctttgcacatgaggagagtgtcatgcaggtcaag
tttgaaagccgctcgcactacttttggaccgttgggaaagataagatggtcaagtattgg
gatggtgacaagttcgagaacatccaaacacttcaaggacatcacggcgagatttcagcc
cttgccgtcagtcacgatggccagctgttgatctctggatctcatgataaatcaatcaga
gtgtggataaagacagacgagccattgttccttgaagaagaacgcgagaaagaactcgaa
cgtctttacagccttgaggaatcggagaaattggatatatcaatcacacaatctagaaag
caaggtgaagaggcgggcgacgaggaggtagaggctgtttccaaacaaacaactgagacg
ttgatggcaggggagagaataatcgaggcgctcctgttggccgatgccgacttggacttg
accaaccggttcaacattgctaaagagaacatggatcctgaaaaagctgagaagcttgcg
ccacctgctcggaatccgattcttgtggcctatgataatatatccgcgtccgcctatgtg
cttaaggtgattcagcgaatacctcgggcggcactggaggacgctctactggtattacct
ttcgcgcaggtgaccatgatgttgactcacattaattactgggctaaaaagggctgctcc
acgtcactcgtctgtcgaatcttgtcatttttgattcgtactcacgaaacacaaatcacg
gtcaccgccagtctcaaattgatgatagattcgatcaaaacaaatatgactaggagcctc
aagaaacacgctgatatggtagcttacaatgtcgaggccatccgatttgtaaaacaggcc
atcgaactggaacaaaaggagagagaatttgtggatatcgatttaaggcctgagcaagaa
gttagaaagctaatcaaggacaaacatatggtcaagaaacggaaagtagttttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (58)   

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