KEGG   Methanothermobacter marburgensis: MTBMA_c06610
Entry
MTBMA_c06610      CDS       T01297                                 
Name
(GenBank) predicted DNA lyase
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
mmg  Methanothermobacter marburgensis
Pathway
mmg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    MTBMA_c06610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mmg03400]
    MTBMA_c06610
Enzymes [BR:mmg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     MTBMA_c06610
DNA repair and recombination proteins [BR:mmg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     MTBMA_c06610
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 LisH
Other DBs
NCBI-ProteinID: ADL58256
UniProt: D9PVK8
Position
complement(600337..601110)
AA seq 257 aa
MAEIKIISWNVNGLRAVYRKGFLDWFMDEKPDILCLQETKASPEQLPRRLRHVEGYRSFF
TPAERKGYSGVAMYTRIPPKSIREGFGVERFDIEGRIQVADFDDFLLYNIYFPNGKMSDE
RLKYKLEFYDAFLEDVNRERDAGRNTVICGDFNTAHREIDLARPKENSNVSGFLPVERAW
IDKFIENGYVDTFRMFNNESGQYTWWSYRTRARERNVGWRLDYFFVNEEFAKNVKRSWIL
SEVMGSDHCPVGLEIEV
NT seq 774 nt   +upstreamnt  +downstreamnt
atggcagaaatcaagataatatcctggaacgttaacggtctgagggccgtataccgtaag
ggcttccttgactggttcatggacgagaaacctgatatcctatgtcttcaggagaccaag
gcgagtccagaacagctccccagaaggctaaggcatgttgagggttacaggagtttcttc
accccggcagaaaggaagggatacagtggagtggccatgtacacaaggatacccccgaaa
tccatcagggagggctttggtgttgagagattcgacattgagggccgcatacaggttgca
gattttgatgacttcctgctctacaacatatacttccccaacgggaagatgtcagatgag
aggttaaagtacaaacttgaattctatgacgcattccttgaggacgtcaacagggagcgg
gacgctggcaggaacacggtaatatgcggtgacttcaacaccgcccacagggagatagac
ctggccaggccaaaggaaaacagcaacgtatcagggtttctaccggttgaaagggcctgg
atagacaaattcattgaaaacgggtatgttgacacattcaggatgttcaacaacgagtca
ggccagtacacatggtggagttacaggaccagggcccgtgagagaaacgtgggatggagg
ctcgactacttctttgtgaatgaggagttcgcaaagaacgttaaaaggtcatggatactc
tcagaggtgatgggctcagaccactgcccagtaggacttgagatagaggtttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system