KEGG   Methanohalophilus mahii: Mmah_1077
Entry
Mmah_1077         CDS       T01211                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
mmh  Methanohalophilus mahii
Brite
KEGG Orthology (KO) [BR:mmh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmh03019]
    Mmah_1077
   03009 Ribosome biogenesis [BR:mmh03009]
    Mmah_1077
   04131 Membrane trafficking [BR:mmh04131]
    Mmah_1077
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmh04147]
    Mmah_1077
Messenger RNA biogenesis [BR:mmh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     Mmah_1077
Ribosome biogenesis [BR:mmh03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    Mmah_1077
Membrane trafficking [BR:mmh04131]
 SNARE
  SNARE associated proteins
   Others
    Mmah_1077
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    Mmah_1077
Exosome [BR:mmh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Mmah_1077
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N AAA_16 RuvB_N AAA_5 AAA_2 CDC48_2 TIP49 AAA_22 AAA_14 AAA_33 IstB_IS21 nSTAND3 Mg_chelatase Sigma54_activat NACHT AAA_28 AAA_18 Parvo_NS1 AAA_24 AAA_17 AAA_7 RNA_helicase Vps4_C NB-ARC Zeta_toxin ABC_tran TsaE AAA_3 AAA_11 ATPase AAA_25 AAA_19 AAA_30 bpMoxR ATPase_2 SLFN-g3_helicase DUF815
Other DBs
NCBI-ProteinID: ADE36585
UniProt: D5EBN4
Position
complement(1103431..1105716)
AA seq 761 aa
MVVIIAGNENVSVKLKVAEAIQKDVGKGVVRIDESFRNKLGLQGLDVVEVIGSRNTPALA
ARAYPSDEGLDIIRMDGLVRTNANTGIGDYIEVRKAQWKEAKNVKLSPVSKGVKIAASGE
MLRSVLQNRPVSKGDFISTTSSSQQKALGGGLMFEDFFQDIFGSSFGLGEIKLQVISTSP
HGIVKITDRTEIELLPEAVELPPEHAIPTVMYEDLGGIKPAIGKIREMIELPLKHPELFD
RLGIDAPKGVLLQGPPGTGKTMLARAVANESDAYFISINGPEIMSKFYGESEQHLRQLFE
DAEANAPSIIFLDEIDSIAPKRAEVTGEVERRVVSQLLSLMDGLKERKNVIVIGATNRPG
ALDMALRRPGRFDREIELRVPDTDGRLEILQIHTRGMPVTEDVNLEELADITYGFVGADI
AALCREAAMSSLRRILPEIDLKAEQIPREIIDKLQVTREDFNEALKTVQPSAMREILIEV
PNVTWEDVGGLEEVKSLLKEAVEWPLKYPDSFRRIGVDAPKGVLLYGPPGTGKTMLAKAI
AHESNVNFISAKGSDLLSKWYGESEKRIAEVFVRARQVAPSIVFLDELDALAPLRGAAAG
EPQVTERIVNQLLSEMDGLEELRGVVVIGATNRPDIIDPALLRPGRFDELIMVPVPDSQT
RNKILQVHTRNMMLAGDVDFSELVKQTDSFTGADIAAVCKKAGRFALREDINASKVQMQH
FQKALEETGPSVTPETTRYYENIRGELRTKQAKGIEGVGYA
NT seq 2286 nt   +upstreamnt  +downstreamnt
gtggtggttattattgctggaaatgagaatgtatctgtaaaactaaaagttgctgaagca
atacagaaagatgtggggaaaggcgttgtccgaatagatgaatctttcaggaataaactt
ggattgcaggggcttgatgtggttgaggtcattggcagtcgtaacacgccagcattagct
gcaagggcttacccatcggatgaaggtctggatataatacgtatggatggtcttgtcagg
acaaatgccaatacaggtatcggtgactatatagaggttcgcaaagcccaatggaaggaa
gcaaagaatgtgaaattatcacctgtaagcaagggagtcaagatagcagcttctggagaa
atgcttcgttcggtattacagaacagacctgtttcaaaaggtgatttcatatcaactaca
agcagcagtcaacagaaagcattgggtggcggccttatgttcgaagacttcttccaggat
atttttggttcttcctttggactgggagaaataaagctgcaggtaatttcaacatctcct
catggtatagtaaagataacagataggacagagatcgaacttttacccgaagcggttgaa
cttcctccggaacatgctattcctactgtaatgtacgaagacctgggaggcataaaacct
gctattggtaagatcagggaaatgattgaacttccccttaaacatccggaattatttgac
aggttgggaattgatgctcccaaaggagttcttttgcagggtcctccgggaaccgggaaa
acaatgctcgcaagggcggtggcaaatgagtctgatgcttattttatttctattaacgga
ccggagattatgtcgaaattctatggagaatcggagcaacatttgcgtcagctattcgaa
gatgcagaagcaaatgcaccttctattatcttccttgatgaaattgattctatagcccca
aagagggcagaagttaccggggaagtagaaaggagggttgtatcacaactactttccctt
atggatggtctcaaagagcgtaagaacgtgattgtaataggggcaaccaacaggccaggt
gccctggatatggcattgagaagaccgggtagatttgaccgtgaaattgaattgcgtgtg
ccggataccgatggcaggcttgaaatccttcagatacatactcgagggatgcccgtaact
gaagatgtgaacctggaagaactggctgatattacatatggatttgtaggtgcggatatt
gcagcattatgtcgtgaagcggcgatgagctctcttcgcaggatactgccggaaattgat
cttaaagctgaacaaattccccgggaaatcatcgataaattacaggtcacaagagaagat
ttcaatgaggcattaaaaacagtacaaccctcggcgatgcgggaaattcttattgaagtt
ccaaatgtaacctgggaggatgtaggcggacttgaagaggtaaaaagccttctcaaagag
gctgtggaatggccactcaagtatccggattctttccgtcgtataggtgtggatgcaccc
aaaggagtattgctctacggaccacccggcacaggtaagactatgctagcaaaagcgatt
gcccatgagtctaatgtgaatttcatttctgccaaaggtagtgatcttctttccaagtgg
tatggtgaatcagaaaaaagaatagctgaagtttttgtaagggcacgtcaggttgctcca
tctattgtgttccttgatgagctggatgcccttgcacccttgagaggtgcagcagcaggt
gagccacaggtgacagagcgtattgtgaaccagttgctttcggaaatggacgggcttgag
gaattgaggggtgttgtggtcatcggtgcaacaaaccgtccggacatcattgatccggct
cttctaaggccgggtcggtttgatgaattgataatggttcctgttccggattcacaaaca
aggaacaaaatcctgcaagtccatacccgcaatatgatgcttgctggtgatgtagatttc
agtgaattggtgaaacagacagacagttttacgggtgcggatattgcggctgtgtgtaaa
aaggccggaaggtttgctttacgtgaggatattaatgccagtaaagttcagatgcaacat
ttccagaaagctctggaagaaacaggtccctcagtaactcccgaaaccacaagatactat
gaaaatatcagaggagaattgaggacaaagcaggcaaagggaatagaaggagttggttat
gcctaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (39)   
   Pfam (39)   
All databases (60)   

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