KEGG   Marmota marmota marmota (Alpine marmot): 107144105
Entry
107144105         CDS       T09644                                 
Symbol
Col19a1
Name
(RefSeq) collagen alpha-1(XIX) chain isoform X3
  KO
K24340  collagen type XIX alpha
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    107144105 (Col19a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:mmma00536]
    107144105 (Col19a1)
Glycosaminoglycan binding proteins [BR:mmma00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107144105 (Col19a1)
Motif
Pfam: Collagen Laminin_G_3
Other DBs
NCBI-GeneID: 107144105
NCBI-ProteinID: XP_015343437
Ensembl: ENSMMMG00000002154
UniProt: A0A8C5YNM2
Position
Unknown
AA seq 1182 aa
MRPPSPLTGSSLGPLLGGAAALSGLHCASEGLKHKFKNCGHLFTWFQDTMRRTGSWKLWP
WVAVFLLPASTSVTVRDKPEKQCPILRTVGYQFTQDNRNELEVSGFDLGESFSLRRAFCE
GDKTCFKLGSALLIRDTIKIFPKGLPEEFSVAAVFRVRRNTKKERWFLWQVLNQKNMPQI
SVIIDGGKKVVEFMFRAAGGDMLNYIFKNRELRLLFDRQWHKLGFSIQSQVLSLYVDCSL
IASRQTDAKDTVDFHGRTVLVARAADGKPVDIELHQLKIYCNANFITQETCCEISATKCP
EQDDFGSTASSSVTAHASKLSTFLPAKQEFRDLCQCVPSKGEAGLPGTPGSPGQKGEPGE
NGLPGAPGLPGQKGEQGFEGSKGEIGEKGEQGAKGDPGLAGLNGQDGLKGDLGPRGPPGP
KGEKGDMGPPGPTALTGSIGMQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGLQGI
QQTLGGYFNKGNGELGAGDPKGEKGETGLPGFPGSVGPKGQKGEPGEPFVKGEKGDQGEP
GIIGSQGIKGEPGDPGPPGSIGNPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGIK
GEKGDPGGIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKGERGLPGVQGSP
GDMGPPGAGIPGKTGSQGPTGEPGIQGPRGLPGLPGTPGTPGNDGAPGRDGKPGLPGPPG
DPIALPLLGDIGALFKNFCGNCQANVPGLKSNKGDEGGAGEPGKYDSITRKGDIGPRGPP
GIPGREGPKGSKGERGYPGIPGERGEEGLQGIPGIPGALGPTGPPGLVGRTGHPGPMGAK
GDKGSEGPPGKPGPPGPPGVPFNEGNGMSSLYKIQGGVNVPSYPGPPGPPGPKGDPGPAG
EPGAMGLPGLEGFPGVKGDRGPAGPPGIAGTSGKPGTPGPPGVPGEPGERGPIGDIGFPG
PEGPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKG
AIGPMGPPGNKGSMGSPGHQGPPGSPGIPGSPADAVSFEEIKKYINQEVQRIFEERMAVF
LSQLKLPAAMLAAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQKGERGEPGIGLPGIPGTS
AMGLPGSPGTPGPQGPPGPSGRCNPEDCLHPVSHAHQRAGGK
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgcgtcccccttccccactcacagggagctcactcgggccactcctcggcggtgcggca
gccctgtccggactccactgcgcctcagaagggctcaaacacaaattcaagaactgtggc
cacttgttcacatggtttcaagacacaatgaggcgcactggctcttggaagctttggcct
tgggtggcagtgttcctgcttcctgcttctacttccgtgacggttagggacaagccagaa
aaacagtgtcctattctgaggacagtgggatatcagttcacacaagacaacagaaatgaa
cttgaagtttcaggttttgatctaggagagagcttttctctgagacgtgcattttgtgaa
ggggataaaacctgtttcaaattgggaagtgcacttcttattagagatactattaagata
tttcctaaaggccttcctgaggagttctctgtagcagctgtgtttcgtgtacgaagaaac
accaaaaaggagcggtggtttctgtggcaggttttaaaccagaaaaatatgccacagatt
tctgtcataattgacggtggaaagaaggtggtagagtttatgttccgagctgctggggga
gacatgttgaattacatttttaaaaatcgggaactccgtcttttgtttgaccgtcagtgg
cataaacttggcttcagcatacaatcccaggtcctttcactctatgtggattgcagttta
attgcaagccggcagactgatgcgaaggacactgtggattttcatgggaggacagttctg
gtggcacgagctgctgatggcaagcctgtggacattgaacttcaccaacttaaaatctac
tgtaatgcaaacttcataactcaagaaacatgttgtgaaatatcagctactaagtgccca
gagcaggatgattttggaagtactgcgtcatcatccgtaactgctcatgccagtaaactg
tctacatttctgcccgcaaagcaggaatttagagacttgtgccagtgcgttccaagcaag
ggagaagcaggattaccagggactccaggttcacctgggcagaaaggagagccgggtgaa
aatggtttacctggtgctccaggcttacctggtcaaaagggagaacaaggttttgaaggc
agcaaaggagaaattggtgaaaagggtgaacaaggagcaaaaggagacccaggactggct
ggccttaatggacaagatggtttgaagggtgacttgggtcctcgtggtccacctggtcca
aaaggagaaaagggagacatggggcctccaggaccaacagccttaactggttccataggg
atgcaaggcccccaaggtccacctggaaaagaaggtcaaaggggaagaagaggaaaaacg
ggaccacctggaaaaccaggacccccaggaccacctggacctcctggattacaaggaata
caacagactcttggtggatattttaacaagggaaatggtgaacttggagctggtgaccct
aaaggagaaaagggtgaaacaggactgccaggatttccagggtctgttggccctaaagga
caaaaaggagaacctggggaaccctttgtaaaaggtgaaaagggagaccaaggagaacct
ggaataataggatcacagggaataaagggagaacctggagaccctggtccccctggttca
ataggaaacccaggactgaagggtcaacaaggacctgcaggttccatgggacccagagga
ccaccaggagatgttggattgccaggagaacatggtatcccaggaaaacaaggcatcaaa
ggagaaaagggagatccaggtgggattataggccctcctgggcttccaggtccgaaaggt
gaggccggtcctccagggaaaagcctgccaggggaaccaggattagatggaaatcctgga
gcacctggtccacgtgggccaaagggtgaaagaggactgccaggtgtccagggctcccca
ggtgacatgggcccaccaggggccggaattcccggcaaaacaggctcccaaggaccaact
ggagagccaggtattcagggtcctcgaggtctccctgggttaccaggaactccagggacc
ccaggaaatgatggagctcccggaagggatggaaagccaggactgccaggtcccccgggt
gacccgattgcccttcctctcttgggagacatcggggccttgttcaagaatttctgtggc
aactgccaagccaatgttcctgggctaaaaagcaacaaaggagatgaaggaggtgctggt
gagcctggaaaatacgattccatcaccaggaagggtgatataggaccacggggtcctcca
ggaattccaggcagagagggaccaaaaggaagcaaaggagagcgcggctaccctggtata
cctggggagagaggtgaagagggtcttcaaggaattccaggcattccaggtgctttgggc
cctactggaccccctggcttagtgggaagaactggacatcctggtcccatgggagcaaag
ggtgacaagggcagtgagggaccccctgggaagcctggaccacctggaccacctggtgta
ccattcaatgaaggaaatggcatgagcagtttatataaaatccagggtggcgtgaacgtt
cctagttatccagggccacctggtccccctggcccaaaaggcgatcctggcccagcggga
gagcctggtgcaatggggttgccaggactagaaggatttccaggtgtaaagggagataga
ggcccagcaggtcctccaggaatagctggaacatcggggaagccaggtaccccagggcct
ccaggagttccaggggagccaggtgagaggggacctattggagatattggtttccctgga
ccagaaggaccctctggaaagccaggaataaatggaaaagatggattaccaggtgctcag
ggcatcatgggtaaacctggagaccgaggccccaaaggagaacggggtgaccagggaatc
ccaggagacagaggtccacaaggtgaacgaggaaaaccaggccttacaggcatgaaagga
gctataggtcctatggggccaccaggaaacaagggctccatgggatcccctggccaccaa
ggccctccaggatccccaggaatccctggctctccggctgatgcagtttcatttgaagaa
ataaagaagtacattaatcaagaggtccaaaggatttttgaagagaggatggctgtgttt
ctatcccaactcaagctgccagcagcaatgttggctgctcaagctcatgggaggcctgga
ccaccaggaaaggatgggttacctgggccaccaggagaccctggaccccaaggctaccga
ggacaaaagggagaaagaggtgaacctggaattggattgccaggtattcctgggacttca
gctatgggtttgccaggctcaccaggtactccagggccccagggccccccaggacccagt
ggaagatgtaacccagaagattgcctccatcctgtgtctcatgcccatcagcgggcaggt
gggaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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