KEGG   Marmota marmota marmota (Alpine marmot): 107150089
Entry
107150089         CDS       T09644                                 
Symbol
Tsen2
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2 isoform X1
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mmma03016]
    107150089 (Tsen2)
Enzymes [BR:mmma01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     107150089 (Tsen2)
Transfer RNA biogenesis [BR:mmma03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    107150089 (Tsen2)
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-GeneID: 107150089
NCBI-ProteinID: XP_015350522
Position
Unknown
AA seq 458 aa
MAEAVFHAPKRKRRVCENYESPLPVPLGQDQDPKKFRIFRAEIINNNVIVRSPEDIKQLY
GKGYFGKGILSRSRPNFTISDPKLVARWKDMKTDLPVISSKKYQRRVEWATSLMRRQGQD
PRTVCEILKEYTKPLEHPCVRRNEEVQVHDAPDPEIASTLGSTVGTENLSEMNEDIGQSH
EPSRHSDDGLQEDSVHDPLTTKGLDARVVEDTTPLPRDVLIPLCGLQPEAGGQQTGLIHA
GERGPDHEYVLVVEEEVCAVSKGDNAPKEEVVQRQKLTCRRNPYRIFEYLQLSLEEAFFL
VYALGCLSIYYEKEPLTILKLWQAFTSIQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDFL
LYWKGPPFYHASYSVIVELVDDRLEGSLRRPFSWKSLATLSRISVNVSKELMLCYLIKPS
TMTDEEMESPECMKRIKVQEVILSRWVSSRERSDQDEL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcggaagcagttttccacgccccaaagaggaaaaggagggtgtgtgagaattacgag
tctccactgccagtccctcttggtcaggaccaagatcctaagaaattcagaatcttccgt
gcagaaataatcaacaacaacgtgattgtgaggagccccgaggacattaagcagctgtat
gggaagggctactttggaaaaggcattctttccagaagccgaccaaacttcacaatttca
gatcctaagctggttgctaggtggaaagatatgaagacagacttgcctgtaatctcatca
aagaagtaccagcgtcgtgtcgaatgggccacgagtctcatgcgcagacaggggcaggac
ccgagaactgtgtgtgagatcctcaaagagtacacaaaaccgcttgaacatccttgtgtc
agaaggaacgaagaggttcaggtgcatgatgcacctgaccctgagatagcttccaccctg
ggaagcacagtgggcaccgagaacctttctgagatgaatgaagacattggacagtcacac
gagcccagcaggcactcagatgacggcctgcaggaggactctgtgcatgacccactcacc
accaagggcctcgatgcgagggtggtagaggacaccacacctctgccccgagatgtcctc
atccccctgtgtggccttcagcctgaggctggcggtcagcaaacaggtcttatccatgct
ggagagagagggcctgaccatgagtatgtgctcgttgtggaagaagaggtgtgtgctgtg
agcaagggggacaacgcccccaaagaggaagtggtgcaaagacagaaattaacgtgcaga
agaaacccgtataggatcttcgagtatttgcagctcagcctagaagaggctttcttcctg
gtctatgccctgggatgtctcagtatttactatgagaaggaacccttgacgatactgaaa
ctctggcaagctttcacttccattcagcccaccttcaggaccacctacatggcctaccac
tacttccgaagcaagggctgggtgcccaaagtggggctcaagtacgggacagatttcttg
ctatattggaaaggcccaccattctaccatgcaagttattctgtcatcgttgagctcgtg
gatgatcgcctggaaggctccctccgcagaccgttcagttggaagtcgctggccaccctg
agcagaatctcagttaatgtctctaaggaacttatgctgtgctatctgattaagccctct
accatgactgacgaggaaatggagtccccagaatgtatgaaacgaattaaagtccaggag
gtgattctcagtcgctgggtttcctcacgagagagaagcgaccaagatgaactctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system