KEGG   Mus musculus (house mouse): 100155
Entry
100155            CDS       T01002                                 
Symbol
Shoc1, Gm426, Mzip2
Name
(RefSeq) shortage in chiasmata 1
Organism
mmu  Mus musculus (house mouse)
SSDB
Motif
Pfam: DUF5587
Other DBs
NCBI-GeneID: 100155
NCBI-ProteinID: NP_001357772
MGI: 2140313
Ensembl: ENSMUSG00000038598
Position
4:complement(59041984..59138983)
AA seq 1481 aa
MALNGRTMFPAFKYYAIDYLQEDIIKERLYRDALLLQIPSCLNQDKNIIDDKYRTPWTRA
IPVQEMEDNSVLEQWRTRFCVEGVPEKKTVTGVMINGTFEEIVPSSNPNSPPGIENDKLF
PSKDYVDDFIPVKCSLYYPGVKAEHQGLLIDEEMIFMNKAMDNHLPTVNGLLSRLKLYLV
KDPFLDFKEELSGKDNFTEYFSVQECSEPFVRDFHMAEETFCKKKLPSVFPSGFKSLIST
NPKQEILILPPSKLKKPLNSIPKIMDSVDESECFKGDITSKHEFDTEDIKCNSTENLTFA
SLCEPECSEPGDLEMPPTHLILPRQHSAVSSLHMGFQTFPFSATCKINLLSAGESANKYC
MLWQLGGCRNSWVSFLLTVPRFQEPSSQYSLADMRNIFSVKGDSLVINPAKAKGWRQARL
HPIMAETLAHLKAYLCHNGLSSQETKLEIFLPTKVFQLESWLELKSRPLPIVPISEKSTD
VHQLHPQKRPIPSSEKEVPHLCLSGESISVKKSKVEANPKNDQEPEARIMQKPENSCVGL
GCSSQVPSAESASSSQIQASYDKKQDDLDLLSEFIILRSKHQTFPSEADVDVKSHDHDQN
NEFQDKEKYSLTLQEESLVASNSKAPEERCEERTDGVIEIPASDTQCQAYCLLEATANPI
LKELVCLCTYPAANWKFATVNFDQTRFFLKEQEKKINDATHPDKNDDRKMTFRHAALLHL
LITIRDVLLTCNLDTALGYLSNAKDIYKSVLDSRLDNIWRQLKILQFIKEKRPKSNYKIQ
ELQCQILSRLQNQQQMKVLIIIRMDSDGEKHLLIKTLKKIEGLTMTVLRSNDRKKILETT
SILKGTNACVVVHNHSIGADFPWSSFSLVVEYNHVGHSCWAEHCQLLDIPFLAFKVAVPD
TALQRDALLDGFGGFLLKIPIPYVFFASEGLLNTPEILRLLESNYNITLVERCCCGSLKL
FGSTECYVVVTVDEHTAIVVQDLEELHHEKASDNIIMRLMALSFQYSCCWIILYSKETLN
SQYHLTEETLRHLAQVYAALVSSGLKSEELDVKLIIAPGVEETALIIRQIADHNLMTSTR
DPHEWLDKSWVEVSPSKEEMSLLDFPCINPLVAQLMLHRAPSLHWLLIATPAELQELLPQ
VPGKVLKHFCSITSLFKISSPSMTKSSQISSLQEDMNQTDLFISQSSAPIIQEQEEYYPY
EDSEGTSSSPVELRATPCMLPSAAPHSQRGCWEDPSCGPDPVQNNPSLMNAESKKVTWPS
VPSWSDSESDVFSLARTQVSCEPIMTLTDSQRRGTNGFVNCPEAKGPRNMQVSTPVFLPE
NSQSHLHWDFKKNSCRKQIYSFNPSCGTEQTTYNKWYSWKDDFSSNQPECLWDEMEDVTY
RNANAGTRETFWRELPAVPSWDSPCASDSNANQRGFKGLDFCQRAGNYLGQRSLPVSSSN
WGDYKTPTDLMYSQVPQPKKRRLMYEKVPGRVDGQTRLKFL
NT seq 4446 nt   +upstreamnt  +downstreamnt
atggcattgaacggaagaactatgtttccagccttcaaatattatgcaatagactattta
caagaggacataattaaagagaggctttacagagatgctttattgcttcagattccttca
tgtttaaatcaagataaaaacattattgatgataaatataggactccatggacaagagct
attccagttcaggaaatggaagataattcagtcttggagcagtggagaacaagattctgt
gtggagggtgttcctgagaaaaagacagttacaggagtgatgattaatggcacatttgag
gaaattgttccaagttccaatccaaactctccacctggaatagagaacgataaactgttc
cccagtaaggactacgtagacgactttattcctgtcaagtgttccttgtactaccccgga
gtgaaagcggagcaccaaggattgcttattgatgaggaaatgatttttatgaataaagca
atggacaaccatctaccaactgtgaatggtctcctgagcagactgaagctctatctggtg
aaggatccatttttagatttcaaagaagagctctctggaaaggataatttcacggagtat
ttctctgttcaagaatgttcggaaccttttgtgagagatttccatatggctgaggagacc
ttttgtaagaagaaactaccatcagtttttccttctgggtttaaatccttgatatctaca
aatcccaaacaagaaattctcattctaccaccatcaaaactgaagaaaccattaaactcg
ataccgaaaataatggactctgtagatgaaagtgaatgtttcaaaggagacattacttcc
aagcatgaatttgatactgaggatataaaatgcaactccacagaaaacttaacatttgca
agcctttgtgaaccagagtgcagtgagccaggagacctagaaatgccaccaacccatcta
atcttaccaaggcagcattctgcagtgagttcattacacatgggatttcagacatttccg
ttttctgctacatgtaaaattaatttgcttagtgctggagaatcagctaataaatattgt
atgctgtggcaactgggaggctgcagaaactcttgggtctcgttcttgcttacagttcca
agatttcaagaacccagcagtcaatattcacttgcagatatgaggaacatcttttctgtc
aaaggagacagccttgtgattaaccctgcaaaagcaaaggggtggagacaagcacgacta
catccaataatggctgaaacgctggcgcatctgaaggcgtatttgtgtcataatggtctg
tcttctcaggagactaagctggagatctttctgcctacaaaagtgtttcagctggagtcc
tggctagaacttaagagtcgtcccttgcccattgtgccaatcagtgagaaatctacagat
gttcaccagttacatccacagaagagaccaataccctcttcagaaaaggaagtaccacac
ctttgtttgtccggtgaaagtatctctgttaaaaaatccaaagtagaagcaaacccaaag
aatgatcaagaaccagaagctagaataatgcagaagccggagaacagctgtgttggactt
ggctgttcaagtcaagtgccatctgctgaatcagcttcctcttcccagatccaggcatct
tatgataaaaaacaagatgatttggaccttctgagcgagtttattattctgagaagtaaa
caccagactttcccttcagaagctgacgtcgatgtcaaaagccatgaccatgaccaaaac
aatgaatttcaagataaagaaaaatattctttgactcttcaagaagaaagtcttgttgct
tctaatagtaaagctccagaggagagatgtgaagaaaggacagatggcgtcatcgagatc
cccgcttcagacacccagtgccaagcatactgtctcctagaagccacagcgaatcctatc
ttaaaggagcttgtttgcctctgtacttaccctgcagccaattggaaattcgccactgtc
aattttgaccaaacaagattcttcttaaaggaacaagaaaaaaagataaatgatgctact
caccccgataaaaatgatgacagaaagatgacattcaggcatgctgctctcttacatctc
ctgataacaattagagacgtccttttaacatgcaacttggatactgcattaggatatttg
tcaaatgcaaaagatatctacaaaagtgtgttagactcccgtttggataacatttggaga
cagctgaaaattttacagtttattaaggaaaaaaggcctaaaagcaactataagatccaa
gaattgcagtgtcaaatactaagtaggctacagaatcaacaacaaatgaaggtactgatt
ataataagaatggactcagatggagaaaagcatctgcttattaaaacacttaagaaaata
gaaggtttaacaatgactgttttacgttctaatgatagaaaaaaaattctggaaactacc
agtattttaaaaggtacgaatgcctgcgtggttgtgcacaaccacagtatcggagcggat
ttcccctggagcagcttctcgctcgtggtggagtacaaccatgtggggcactcttgctgg
gccgagcactgccaactgttggatataccttttctggcctttaaagtcgctgttccagac
acagctctgcagagagatgccttgctggatggatttggtgggtttctcttgaaaattccc
attccatatgtattttttgcatctgaaggacttctcaatactccagagatactccggctg
ctggagtccaactataatatcacactagtggagagatgctgctgtgggtcactgaaactc
tttggaagtacagagtgctatgtggtggtgacagtcgacgagcatactgctatagttgtg
caggacctagaagagttacatcatgagaaggcatcagacaatatcatcatgagattaatg
gcactgtcgttccagtatagctgttgctggataatactatattccaaggaaacactaaat
tcacaataccatcttacagaagagacacttcgtcacctcgcacaggtttatgcagctctg
gtttcctcgggcctgaaatctgaagagctggatgtaaagcttataattgcccctggagta
gaagagactgctttaataattcgacaaattgcagaccacaatttaatgacgtcgacgaga
gatccccatgaatggttggataaatcctgggtggaagtttcaccttctaaggaggaaatg
agcctacttgattttccctgtataaacccactggtggctcagctcatgttacacagggcg
ccttcgctgcactggctcctgatagcaacgcctgctgagctccaggaactcctgccccag
gttccaggcaaagtactgaagcatttttgcagcatcacttccttgttcaagattagttct
ccctccatgacaaagtcttctcagatttcatcacttcaggaagatatgaatcaaactgat
ctctttatttctcagagttcagctcctatcattcaagaacaggaggaatattatccctat
gaagactcggaaggcacaagctcttctcctgtggagctaagagcaactccatgcatgctg
ccatctgcagcaccgcacagtcagaggggctgctgggaggaccccagctgtggccctgac
cccgtgcagaataacccttccctaatgaatgcagaatcaaagaaagtcacctggccctcc
gttcccagctggagtgattcagaatcagatgtcttttctctggcccgaacacaagtaagt
tgtgaacccataatgacactaactgattctcaaaggagaggcacaaatggttttgtaaat
tgtcccgaagccaaaggacccagaaacatgcaagtgtccacccctgtctttttaccagag
aactcccagtcccaccttcactgggactttaagaaaaacagttgtagaaaacagatttac
tcgttcaatccaagctgtggaacagaacagactacttacaacaaatggtactcttggaaa
gatgacttctccagtaatcagcccgagtgtctgtgggatgagatggaagatgtcacatac
agaaatgcaaatgctgggacccgggagactttttggagagaactgccagctgttccaagt
tgggattcaccctgtgcttctgattctaatgcaaatcaaagagggttcaagggccttgat
ttctgccaaagagctggaaactacttaggacagagaagcctccctgtgtcttcatctaat
tggggagattacaaaacaccaacagacttaatgtactcacaagtaccacaacccaagaaa
cgacgtctaatgtatgagaaagtccctggaagagtggatgggcaaacccggctgaagttt
ttatga

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Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG GENES (1)   
   RefGene (47)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (59)   

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